Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
PDLIM1O00151 AC008163.1-202ENST00000636004 2889 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 MIR96-201ENST00000362288 78 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 RNU4-80P-201ENST00000363200 141 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 SNORD113-8-201ENST00000363497 74 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 MIR15B-201ENST00000385045 98 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 RNU6-101P-201ENST00000410323 104 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 AC245047.8-201ENST00000456455 284 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 Y_RNA.639-201ENST00000458981 102 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 SNORA74.3-201ENST00000517108 154 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 AC136628.3-201ENST00000521868 290 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
PDLIM1O00151 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
PDLIM1O00151 AC068700.1-201ENST00000565862 3754 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 RNU6-1048P-201ENST00000364054 107 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 RNU6-450P-201ENST00000364654 107 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 SNORA63.7-201ENST00000365579 123 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 Y_RNA.389-201ENST00000383924 113 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 Y_RNA.509-201ENST00000384506 99 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 SNORA36B-201ENST00000410438 131 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
PDLIM1O00151 Y_RNA.676-201ENST00000516393 96 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 RNU6-988P-201ENST00000519081 107 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.88□□□□□ -2.27
PDLIM1O00151 MIR2681-201ENST00000581814 105 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 PRELID3BP2-201ENST00000605362 201 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 MIR376A1-201ENST00000616574 68 ntBASIC0.88□□□□□ -2.27
PDLIM1O00151 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
PDLIM1O00151 Y_RNA.28-201ENST00000362554 111 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 RNU6-1209P-201ENST00000363655 107 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 RNU5E-4P-201ENST00000364931 120 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 RNU6-867P-201ENST00000364956 107 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 SNORD38C-201ENST00000384381 69 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 PMCHL1-202ENST00000423102 261 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 RNU7-141P-201ENST00000459304 62 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 Y_RNA.715-201ENST00000517082 110 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 Y_RNA.721-201ENST00000517207 102 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.87□□□□□ -2.27
PDLIM1O00151 C8orf59P2-201ENST00000603441 271 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 AL391903.3-201ENST00000612158 163 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 AL160413.1-201ENST00000622780 310 ntBASIC0.87□□□□□ -2.27
PDLIM1O00151 Y_RNA.183-201ENST00000363882 113 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU6-801P-201ENST00000364087 105 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 Y_RNA.330-201ENST00000365230 109 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 Y_RNA.460-201ENST00000384255 102 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU6-823P-201ENST00000391042 103 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 Y_RNA.645-201ENST00000391229 102 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU2-14P-201ENST00000411053 191 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 POLR2J4-204ENST00000418424 324 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU7-90P-201ENST00000459216 62 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU6-437P-201ENST00000459408 95 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU7-21P-201ENST00000459430 62 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RPS26P48-201ENST00000491713 339 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 RNU6-897P-201ENST00000517135 105 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.86□□□□□ -2.27
PDLIM1O00151 MIR4764-201ENST00000580680 88 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 MIR4300-201ENST00000581016 96 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 AC087685.1-201ENST00000587507 141 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 AC104695.3-201ENST00000604052 296 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 MIR6504-201ENST00000613520 61 ntBASIC0.86□□□□□ -2.27
PDLIM1O00151 AC134026.1-201ENST00000623249 2239 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 SNORA25.3-201ENST00000363205 127 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNU6-442P-201ENST00000383968 104 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNU6-474P-201ENST00000384243 107 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
PDLIM1O00151 SNORA75.2-201ENST00000391138 150 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 SNORA75.3-201ENST00000391231 150 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 MTCO2P33-201ENST00000402100 465 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 MIR1278-201ENST00000408753 81 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 MIR1252-201ENST00000408861 65 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 snoU13.25-201ENST00000458945 104 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 Y_RNA.631-201ENST00000459607 101 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNU7-41P-201ENST00000515917 61 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNU7-43P-201ENST00000516554 64 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 RNU6-1007P-201ENST00000516586 107 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.85□□□□□ -2.27
PDLIM1O00151 RPL23AP91-201ENST00000569211 455 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.85□□□□□ -2.27
PDLIM1O00151 MIR103A2-201ENST00000362154 78 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 RNU4-90P-201ENST00000362773 141 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 Y_RNA.148-201ENST00000363557 117 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 SNORD114-27-201ENST00000363766 70 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 Y_RNA.796-201ENST00000364268 102 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 Y_RNA.799-201ENST00000364992 102 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 SNORA72.4-201ENST00000384174 132 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 Y_RNA.569-201ENST00000384749 103 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.84□□□□□ -2.27
PDLIM1O00151 RNU6-191P-201ENST00000516295 94 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 SNORA40.15-201ENST00000516884 107 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.84□□□□□ -2.27
PDLIM1O00151 AC136443.5-201ENST00000603741 370 ntBASIC0.84□□□□□ -2.27
PDLIM1O00151 RAC1P9-201ENST00000604990 392 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms