Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
NEDD8-MDP1E9PL57 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
NEDD8-MDP1E9PL57 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 snoU2_19.2-201ENST00000363024 80 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 Y_RNA.153-201ENST00000363615 91 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU6-770P-201ENST00000363929 105 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU6-1048P-201ENST00000364054 107 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 Y_RNA.202-201ENST00000364083 110 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 Y_RNA.276-201ENST00000364732 109 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 SNORA33.2-201ENST00000365413 134 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AC117470.1-201ENST00000381974 330 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU6-1227P-201ENST00000383981 107 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 U8.19-201ENST00000459095 133 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU6-764P-201ENST00000516396 105 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AC131281.1-201ENST00000522984 164 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AC127455.1-201ENST00000565496 145 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AL356055.1-201ENST00000602528 446 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 AL355297.3-201ENST00000604082 446 ntBASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
NEDD8-MDP1E9PL57 Y_RNA.203-201ENST00000364106 102 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 SNORD50B-201ENST00000364995 70 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 RNU6-969P-201ENST00000383900 105 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 SNORA72.4-201ENST00000384174 132 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 MIR215-201ENST00000384858 110 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 SNORA26.5-201ENST00000391215 123 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 MIR1298-201ENST00000408783 112 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 SNRPGP10-201ENST00000432323 225 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 MIR548AY-201ENST00000617669 107 ntBASIC1.09□□□□□ -2.23
NEDD8-MDP1E9PL57 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.11-201ENST00000362375 109 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU4-90P-201ENST00000362773 141 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.569-201ENST00000384749 103 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 AL451046.2-201ENST00000403074 277 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-985P-201ENST00000410182 104 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 MLLT10P1-201ENST00000418346 262 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 AC005534.2-201ENST00000431047 433 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 MTCO1P5-201ENST00000433573 344 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU7-141P-201ENST00000459304 62 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 AC044792.1-201ENST00000593294 196 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.19-201ENST00000362462 99 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.210-201ENST00000364161 110 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.541-201ENST00000384640 113 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-1248P-201ENST00000391096 64 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 RPL21P38-201ENST00000418090 167 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 RPL23AP54-201ENST00000495129 419 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-322P-201ENST00000516010 103 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 FAM106DP-201ENST00000586416 501 ntBASIC1.07□□□□□ -2.24
NEDD8-MDP1E9PL57 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AC134026.1-201ENST00000623249 2239 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.64-201ENST00000362845 102 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-674P-201ENST00000363831 107 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.336-201ENST00000365307 109 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 SNORA36B-201ENST00000410438 131 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.637-201ENST00000459424 114 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 MRPS35P2-201ENST00000508242 191 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 RNY3P15-201ENST00000516297 97 ntBASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.06□□□□□ -2.24
NEDD8-MDP1E9PL57 AC068700.1-201ENST00000565862 3754 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-1084P-201ENST00000362498 107 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-290P-201ENST00000365212 101 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-131P-201ENST00000391144 107 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR1278-201ENST00000408753 81 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 snoU13.25-201ENST00000458945 104 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 RPS29P1-201ENST00000465274 159 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 AC048334.1-201ENST00000477975 159 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 NDUFA4P2-201ENST00000489989 244 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 RNU6-113P-201ENST00000516653 101 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 SNORA40.15-201ENST00000516884 107 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 AC090142.3-201ENST00000519012 385 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.05□□□□□ -2.24
NEDD8-MDP1E9PL57 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 Y_RNA.363-201ENST00000365529 113 ntBASIC1.04□□□□□ -2.24
NEDD8-MDP1E9PL57 MIR452-201ENST00000385020 85 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms