Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 SNORD63-201ENST00000384262 68 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 HMGN1P10-201ENST00000474557 553 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 RNU7-116P-201ENST00000516940 62 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 LARP7P1-201ENST00000605576 316 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
NPIPA2E9PIF3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 AC117470.1-201ENST00000381974 330 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR520C-201ENST00000385005 87 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR1302-11-201ENST00000408051 138 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR1302-9-201ENST00000408365 138 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR1302-10-201ENST00000408734 138 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 POLR2KP2-201ENST00000438155 177 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MTND4P19-201ENST00000446659 478 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 AC245047.8-201ENST00000456455 284 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 U8.19-201ENST00000459095 133 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 RNU6-397P-201ENST00000516226 104 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 RNU7-115P-201ENST00000516433 55 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.713-201ENST00000517013 96 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 SNORA74.3-201ENST00000517108 154 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 AP003357.1-201ENST00000604497 148 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 MIR1302-2-201ENST00000607096 138 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 AL391903.3-201ENST00000612158 163 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 AC068700.1-201ENST00000565862 3754 ntBASIC0.88□□□□□ -2.27
NPIPA2E9PIF3 RNU4-80P-201ENST00000363200 141 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 RNU6-969P-201ENST00000383900 105 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 MIR1278-201ENST00000408753 81 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 MTND4LP11-201ENST00000422184 280 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 RNU7-41P-201ENST00000515917 61 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 MIR151B-201ENST00000584249 96 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 AC124312.5-201ENST00000604451 268 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 MIR548AY-201ENST00000617669 107 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 AC090971.5-201ENST00000621102 293 ntBASIC0.87□□□□□ -2.27
NPIPA2E9PIF3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 RNU2-14P-201ENST00000411053 191 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 AC022028.1-201ENST00000412054 408 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 RNU7-21P-201ENST00000459430 62 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 SEPT14P8-201ENST00000508026 178 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 AC127455.1-201ENST00000565496 145 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 SNORD113-5-201ENST00000607261 78 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 JPX_2.1-201ENST00000614161 69 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 AC134026.1-201ENST00000623249 2239 ntBASIC0.86□□□□□ -2.27
NPIPA2E9PIF3 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 SNORD113-8-201ENST00000363497 74 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 SNORD14E-201ENST00000364009 85 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 RNU6-450P-201ENST00000364654 107 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 SNORD42.2-201ENST00000365570 69 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.395-201ENST00000383945 109 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.445-201ENST00000384168 102 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.645-201ENST00000391229 102 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.602-201ENST00000410535 92 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 HMGN2P32-201ENST00000444648 269 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 RNU7-141P-201ENST00000459304 62 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 SNORD123-201ENST00000459473 70 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 RNU6-475P-201ENST00000516073 104 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 MIR4764-201ENST00000580680 88 ntBASIC0.85□□□□□ -2.27
NPIPA2E9PIF3 MIR103A2-201ENST00000362154 78 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 RNU6-801P-201ENST00000364087 105 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 SNORA36B-201ENST00000410438 131 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 AC022709.1-201ENST00000615967 87 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 MIR6515-201ENST00000619843 57 ntBASIC0.84□□□□□ -2.27
NPIPA2E9PIF3 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 MIR802-201ENST00000390235 94 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
NPIPA2E9PIF3 PMCHL1-202ENST00000423102 261 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms