Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SNORD13-201ENST00000459299 104 ntBASIC2.53□□□□□ -2
CCDC85CA6NKD9 RNU6-1219P-201ENST00000516143 112 ntBASIC2.53□□□□□ -2
CCDC85CA6NKD9 RNU6-861P-201ENST00000516745 106 ntBASIC2.53□□□□□ -2
CCDC85CA6NKD9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.53□□□□□ -2
CCDC85CA6NKD9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
CCDC85CA6NKD9 RNA5SP190-201ENST00000365222 118 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 MIR522-201ENST00000385071 87 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 RNU4-43P-201ENST00000410628 137 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 FTH1P12-201ENST00000432137 551 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 SNRPGP10-201ENST00000432323 225 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 AC245047.8-201ENST00000456455 284 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 OR9P1P-201ENST00000496431 281 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 SNORD77.4-201ENST00000516158 81 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 uc_338.4-201ENST00000616635 176 ntBASIC2.52□□□□□ -2.01
CCDC85CA6NKD9 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.270-201ENST00000364693 104 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 RNU6-1138P-201ENST00000365359 106 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 AL606845.1-201ENST00000404881 255 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 HSPE1P9-201ENST00000440046 311 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 NDUFA4P2-201ENST00000489989 244 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 AC109810.1-201ENST00000534066 224 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 AL160236.1-201ENST00000556317 195 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 AC022254.1-201ENST00000567857 235 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC85CA6NKD9 ZNF702P-202ENST00000434269 1966 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.182-201ENST00000363880 111 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.205-201ENST00000364128 113 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 RNU6-209P-201ENST00000384118 107 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.441-201ENST00000384123 112 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 MT-TT-201ENST00000387460 66 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 AL445646.1-201ENST00000431784 216 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 AC023449.1-201ENST00000454464 154 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.797-201ENST00000515977 94 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.662-201ENST00000516028 97 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC85CA6NKD9 MIR126-201ENST00000362291 85 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 SNORA4.2-201ENST00000365313 147 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 AL034345.1-201ENST00000407768 123 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 snoU13.27-201ENST00000459278 104 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 RNU6-126P-201ENST00000516685 103 ntBASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC85CA6NKD9 AL442644.1-201ENST00000454390 3105 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.150-201ENST00000363562 102 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 RNU6-360P-201ENST00000390944 104 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 RNU2-7P-201ENST00000410794 178 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 STAG3L5P-204ENST00000443759 179 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 MIR4662B-201ENST00000579498 81 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 AL773524.1-201ENST00000614065 229 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
CCDC85CA6NKD9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 MIRLET7C-201ENST00000362160 84 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 RNU6-728P-201ENST00000365375 104 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 RNU6-484P-201ENST00000384016 107 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.464-201ENST00000384282 110 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 RNU6-131P-201ENST00000391144 107 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 RPL30P13-201ENST00000418873 348 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 RNU6-1212P-201ENST00000517023 104 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AC008507.4-201ENST00000585464 127 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AL049861.1-201ENST00000603130 150 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 AC097639.2-201ENST00000603159 172 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 MIR6515-201ENST00000619843 57 ntBASIC2.47□□□□□ -2.01
CCDC85CA6NKD9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.01
CCDC85CA6NKD9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 AL590004.2-201ENST00000404787 371 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 AC244636.1-201ENST00000421152 228 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 MIR4709-201ENST00000577272 72 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 MIR4431-201ENST00000579990 94 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 AC027279.3-201ENST00000625055 122 ntBASIC2.46□□□□□ -2.02
CCDC85CA6NKD9 RNA5SP276-201ENST00000362580 94 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 Y_RNA.327-201ENST00000365201 102 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 RN7SKP51-201ENST00000410781 304 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms