Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RPS27P1-201ENST00000450552 247 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 RNU6-1132P-201ENST00000459214 107 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 AC100767.1-201ENST00000528178 123 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 MIR4423-201ENST00000580922 80 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 MIR520G-201ENST00000385064 90 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.679-201ENST00000516416 91 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 AC011921.3-201ENST00000605540 361 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
SMCHD1A6NHR9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNU6-833P-201ENST00000363486 107 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 AL158823.1-201ENST00000418441 478 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 MIR3660-201ENST00000584845 100 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.286-201ENST00000364813 102 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.288-201ENST00000364854 92 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNA5SP323-201ENST00000391094 133 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 MIR1267-201ENST00000408723 78 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNA5SP100-201ENST00000410903 110 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNA5SP59-201ENST00000410922 110 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RNA5SP501-201ENST00000410990 112 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 RPS26P45-201ENST00000471748 340 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 MIR6515-201ENST00000619843 57 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 AC027279.3-201ENST00000625055 122 ntBASIC1.56□□□□□ -2.16
SMCHD1A6NHR9 SNORA25.1-201ENST00000362326 128 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.214-201ENST00000364201 112 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 RNU6-1264P-201ENST00000383891 107 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 RNU6-950P-201ENST00000384651 107 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 AC073349.3-201ENST00000617616 186 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 AC080100.1-201ENST00000624239 5356 ntBASIC1.55□□□□□ -2.16
SMCHD1A6NHR9 SNORD38C-201ENST00000384381 69 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 MIR520A-201ENST00000384862 85 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 RNU6-131P-201ENST00000391144 107 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 COX6CP10-201ENST00000416832 224 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.637-201ENST00000459424 114 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 AC117454.1-201ENST00000491120 168 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 RNU4-57P-201ENST00000515980 135 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 uc_338.4-201ENST00000616635 176 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 MIR548AY-201ENST00000617669 107 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 SNORA20.1-201ENST00000364790 130 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 AL356379.1-201ENST00000414105 126 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 RPL30P13-201ENST00000418873 348 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 U8.19-201ENST00000459095 133 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 AC073413.2-201ENST00000604332 360 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 SNORD14A-201ENST00000606526 91 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 AC095038.3-201ENST00000634439 195 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 Z82195.2-201ENST00000612348 18351 ntBASIC1.54□□□□□ -2.16
SMCHD1A6NHR9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 AC068700.1-201ENST00000565862 3754 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 RNU6-653P-201ENST00000363074 106 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 MIR548A2-201ENST00000384956 97 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 MIR873-201ENST00000401120 77 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 RNU2-40P-201ENST00000410833 196 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 AP002392.1-201ENST00000537692 208 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 snoU18.1-201ENST00000629629 71 ntBASIC1.53□□□□□ -2.16
SMCHD1A6NHR9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 U8.7-201ENST00000364940 136 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 FTH1P12-201ENST00000432137 551 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 OR9P1P-201ENST00000496431 281 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-63P-201ENST00000516690 95 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 AC021506.2-201ENST00000612354 169 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.7-201ENST00000362352 102 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.83-201ENST00000363005 113 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-103P-201ENST00000363686 107 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.253-201ENST00000364562 112 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNY3P5-201ENST00000384127 102 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-493P-201ENST00000391321 108 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-197P-201ENST00000516680 100 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 AL096840.1-201ENST00000603287 93 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 AL591926.4-201ENST00000616895 298 ntBASIC1.52□□□□□ -2.17
SMCHD1A6NHR9 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
SMCHD1A6NHR9 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
SMCHD1A6NHR9 Y_RNA.556-201ENST00000384677 113 ntBASIC1.51□□□□□ -2.17
SMCHD1A6NHR9 MIR597-201ENST00000384968 97 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms