Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-203P-201ENST00000384038 104 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.571-201ENST00000384753 98 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 AL606845.1-201ENST00000404881 255 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 RPL30P13-201ENST00000418873 348 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.700-201ENST00000516806 100 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 SNORA81.3-201ENST00000517283 198 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 AP002392.1-201ENST00000537692 208 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 MIR4762-201ENST00000585261 75 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 uc_338.4-201ENST00000616635 176 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 SNORD3E-202ENST00000627253 216 ntBASIC1.9□□□□□ -2.11
MBD3L4A6NDZ8 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.29-201ENST00000362570 113 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-103P-201ENST00000363686 107 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.238-201ENST00000364441 102 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 SCARNA8-201ENST00000515924 131 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 MIR4778-201ENST00000577635 80 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 AC087685.1-201ENST00000587507 141 ntBASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
MBD3L4A6NDZ8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 MIRLET7C-201ENST00000362160 84 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.182-201ENST00000363880 111 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 SNORD14E-201ENST00000364009 85 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 SNORA80E-201ENST00000384744 137 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-918P-201ENST00000391219 106 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 RNA5SP181-201ENST00000410246 98 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 AC114811.1-201ENST00000507207 168 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.797-201ENST00000515977 94 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 SNORD45.4-201ENST00000516629 73 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 RNU7-149P-201ENST00000516739 59 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 AC022559.1-201ENST00000520905 205 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MBD3L4A6NDZ8 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 SNORD50B-201ENST00000364995 70 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.785-201ENST00000384290 109 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 MIR660-201ENST00000385235 97 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-1228P-201ENST00000391014 107 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 MIR891A-201ENST00000401237 79 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AL445646.1-201ENST00000431784 216 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 MIR4744-201ENST00000581563 82 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AC008507.4-201ENST00000585464 127 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AC095038.3-201ENST00000634439 195 ntBASIC1.87□□□□□ -2.11
MBD3L4A6NDZ8 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.121-201ENST00000363309 113 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 HMGN2P32-201ENST00000444648 269 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 SNORD77.4-201ENST00000516158 81 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 RNA5SP402-201ENST00000517148 110 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 Pinc.1-201ENST00000616452 154 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 AC027279.3-201ENST00000625055 122 ntBASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.233-201ENST00000364407 101 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.242-201ENST00000364473 110 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-728P-201ENST00000365375 104 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-442P-201ENST00000383968 104 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 SNORD72-201ENST00000390994 80 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-182P-201ENST00000516970 105 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 AC072026.1-201ENST00000605023 201 ntBASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MBD3L4A6NDZ8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 Y_RNA.435-201ENST00000384095 112 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 MIR194-1-201ENST00000384892 85 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 RNU6-578P-201ENST00000390980 103 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AC004965.1-201ENST00000413033 213 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AL121914.1-201ENST00000450188 156 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 SUMO2P16-201ENST00000519475 264 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AC109810.1-201ENST00000534066 224 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 MIR4662B-201ENST00000579498 81 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AC108706.1-201ENST00000611053 297 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 AC004792.1-201ENST00000614523 137 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms