Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 COX6CP14-201ENST00000469580 174 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 JPX_2.1-201ENST00000614161 69 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 AL365265.1-201ENST00000621045 234 ntBASIC2.03□□□□□ -2.08
TRIM43BA6NCK2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.02□□□□□ -2.09
TRIM43BA6NCK2 RNU4-41P-201ENST00000364426 143 ntBASIC2.02□□□□□ -2.09
TRIM43BA6NCK2 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
TRIM43BA6NCK2 RNU7-95P-201ENST00000459222 64 ntBASIC2.02□□□□□ -2.09
TRIM43BA6NCK2 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.199-201ENST00000364014 102 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.257-201ENST00000364596 102 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 RNY4P28-201ENST00000365281 93 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 RNU6-360P-201ENST00000390944 104 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 MIR1298-201ENST00000408783 112 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 FTH1P12-201ENST00000432137 551 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 HMGN1P7-201ENST00000491722 313 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 AC100767.1-201ENST00000528178 123 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 MIR5688-201ENST00000580619 83 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 AC009779.6-201ENST00000603972 165 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 AC090425.1-201ENST00000610007 140 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.01□□□□□ -2.09
TRIM43BA6NCK2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.83-201ENST00000363005 113 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRIM43BA6NCK2 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.626-201ENST00000411288 95 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2□□□□□ -2.09
TRIM43BA6NCK2 AC023449.1-201ENST00000454464 154 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 snoU13.18-201ENST00000459483 104 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.714-201ENST00000517065 90 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 AC011921.3-201ENST00000605540 361 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2□□□□□ -2.09
TRIM43BA6NCK2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM43BA6NCK2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 MIR126-201ENST00000362291 85 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 SNORD68-201ENST00000363214 84 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 RNU4-10P-201ENST00000364383 140 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM43BA6NCK2 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.24-201ENST00000362508 103 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 RNU4-17P-201ENST00000365598 141 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 RNU6-969P-201ENST00000383900 105 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 MIR1276-201ENST00000408707 83 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 RPL23AP91-201ENST00000569211 455 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 MIR4255-201ENST00000579351 72 ntBASIC1.98□□□□□ -2.09
TRIM43BA6NCK2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 RNU6-653P-201ENST00000363074 106 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 RNU6-1318P-201ENST00000365389 103 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 RNA5SP496-201ENST00000391240 109 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 MIR1278-201ENST00000408753 81 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 AC130289.1-201ENST00000577321 73 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 SNORA4-201ENST00000584302 138 ntBASIC1.97□□□□□ -2.09
TRIM43BA6NCK2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
TRIM43BA6NCK2 Y_RNA.308-201ENST00000365043 101 ntBASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 AL512598.1-201ENST00000610158 273 ntBASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRIM43BA6NCK2 MIR411-201ENST00000362239 96 ntBASIC1.95□□□□□ -2.1
TRIM43BA6NCK2 RNU6-923P-201ENST00000364753 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms