Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.180-201ENST00000363867 113 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD50B-201ENST00000364995 70 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.432-201ENST00000384087 111 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 RNU6-1031P-201ENST00000384773 107 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD88.1-201ENST00000408684 91 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 AC244636.1-201ENST00000421152 228 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 FTH1P12-201ENST00000432137 551 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 AC026436.1-201ENST00000510537 270 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 MRPS17P9-201ENST00000511924 393 ntBASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.23-201ENST00000362496 106 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 snoU2-30.1-201ENST00000365012 70 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD72-201ENST00000390994 80 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 CALM2P4-201ENST00000430810 426 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 SCARNA16.3-201ENST00000516595 184 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD45.4-201ENST00000516629 73 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 RNU6-548P-201ENST00000517083 115 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 MIR6873-201ENST00000622788 63 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD14E-201ENST00000364009 85 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 RNU5E-9P-201ENST00000411164 104 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 RPL23AP42-201ENST00000471152 471 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 RNU7-12P-201ENST00000516030 62 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD77.4-201ENST00000516158 81 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 RNA5SP168-201ENST00000516642 112 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 MIR4431-201ENST00000579990 94 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.36□□□□□ -2.03
CCDC163A0A0D9SF12 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 RNU6-804P-201ENST00000384286 107 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.521-201ENST00000384560 114 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 U8.16-201ENST00000391279 133 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 AL590004.2-201ENST00000404787 371 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 AC114811.1-201ENST00000507207 168 ntBASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.272-201ENST00000364696 102 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.486-201ENST00000384398 107 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC107027.2-201ENST00000512197 115 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 Y_RNA.676-201ENST00000516393 96 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC008507.4-201ENST00000585464 127 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC120024.3-201ENST00000603167 156 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC021506.2-201ENST00000612354 169 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AL353997.5-201ENST00000618886 171 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 MIR219B-201ENST00000637023 88 ntBASIC2.34□□□□□ -2.03
CCDC163A0A0D9SF12 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.04
CCDC163A0A0D9SF12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC163A0A0D9SF12 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-643P-201ENST00000384018 107 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-360P-201ENST00000390944 104 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-1135P-201ENST00000411083 103 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 RNU2-55P-201ENST00000411146 174 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 AL096840.1-201ENST00000603287 93 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 AC021753.1-201ENST00000635724 168 ntBASIC2.33□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.91-201ENST00000363042 107 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-1062P-201ENST00000383908 107 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 SNORA26-201ENST00000391286 122 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 AC093850.1-201ENST00000454121 251 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-365P-201ENST00000517113 106 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 MIR4778-201ENST00000577635 80 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 MIR4662B-201ENST00000579498 81 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 MIR4762-201ENST00000585261 75 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 SNORD3E-202ENST00000627253 216 ntBASIC2.32□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-414P-201ENST00000363705 104 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 RNU4-84P-201ENST00000364200 139 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 U8.5-201ENST00000364528 136 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.634-201ENST00000364811 113 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 SNORD116-18-201ENST00000383961 92 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-442P-201ENST00000383968 104 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-484P-201ENST00000384016 107 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 HMGN2P23-201ENST00000456759 269 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 CYCTP-201ENST00000504253 315 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 RNA5SP458-201ENST00000516188 119 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-197P-201ENST00000516680 100 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 MIR3144-201ENST00000579460 79 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 AC087685.1-201ENST00000587507 141 ntBASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.242-201ENST00000364473 110 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-1138P-201ENST00000365359 106 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.398-201ENST00000383952 99 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 RNU6-439P-201ENST00000384188 106 ntBASIC2.3□□□□□ -2.04
CCDC163A0A0D9SF12 Y_RNA.464-201ENST00000384282 110 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 310.7 ms