Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-47P-201ENST00000383866 107 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 Z98949.2-201ENST00000440996 144 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 AP002392.1-201ENST00000537692 208 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 SNORA28-201ENST00000606769 126 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 AL391903.3-201ENST00000612158 163 ntBASIC2.13□□□□□ -2.07
PCDHA3Q9Y5H8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.238-201ENST00000364441 102 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 RNY3P5-201ENST00000384127 102 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.571-201ENST00000384753 98 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 JPX_2.1-201ENST00000614161 69 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PCDHA3Q9Y5H8 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-360P-201ENST00000390944 104 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 SNORD11-201ENST00000459124 84 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 SCARNA8-201ENST00000515924 131 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 RPL23AP91-201ENST00000569211 455 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 MIR4762-201ENST00000585261 75 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 AC098479.1-201ENST00000609225 154 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 AL591926.4-201ENST00000616895 298 ntBASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
PCDHA3Q9Y5H8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.233-201ENST00000364407 101 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 U8.5-201ENST00000364528 136 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-1228P-201ENST00000391014 107 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 SNRPGP10-201ENST00000432323 225 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 HSPE1P9-201ENST00000440046 311 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 Y_RNA.714-201ENST00000517065 90 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 MIR4744-201ENST00000581563 82 ntBASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA3Q9Y5H8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 MIR126-201ENST00000362291 85 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU4-70P-201ENST00000384579 139 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-1031P-201ENST00000384773 107 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 MIR522-201ENST00000385071 87 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 AL034345.1-201ENST00000407768 123 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 MIR1261-201ENST00000408659 82 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 PIGPP3-201ENST00000425307 415 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 AC023449.1-201ENST00000454464 154 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 snoU13.27-201ENST00000459278 104 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 OR9P1P-201ENST00000496431 281 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU1-41P-201ENST00000516161 162 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU1-48P-201ENST00000516400 162 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-1007P-201ENST00000516586 107 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU6-453P-201ENST00000516819 85 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 AC087685.1-201ENST00000587507 141 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RNU2-4P-201ENST00000606190 192 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 FTX_2.1-201ENST00000618816 94 ntBASIC2.09□□□□□ -2.07
PCDHA3Q9Y5H8 RN7SKP223-201ENST00000410582 62 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 AC245047.8-201ENST00000456455 284 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 AC022254.1-201ENST00000567857 235 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4709-201ENST00000577272 72 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 uc_338.4-201ENST00000616635 176 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 U6.106-201ENST00000636360 105 ntBASIC2.08□□□□□ -2.08
PCDHA3Q9Y5H8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.75-201ENST00000362927 97 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 SNORA64-201ENST00000384674 134 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 MT-TT-201ENST00000387460 66 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 SNORA12.1-201ENST00000390873 148 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-578P-201ENST00000390980 103 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 RNU2-55P-201ENST00000411146 174 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms