Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA11Q9Y5H2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR302B-201ENST00000362188 73 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 Y_RNA.241-201ENST00000364470 117 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU6-905P-201ENST00000384434 107 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR449B-201ENST00000384995 97 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 SNX2P2-201ENST00000424553 323 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU7-123P-201ENST00000515911 60 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 AC022513.1-201ENST00000624512 117 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.13□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA38-201ENST00000363946 132 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR548D2-201ENST00000384955 97 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR1302-4-201ENST00000408701 150 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 AC015922.2-201ENST00000435593 184 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU7-96P-201ENST00000459535 64 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 AC107297.1-201ENST00000459991 176 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR5094-201ENST00000578766 85 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA11Q9Y5H2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA25.6-201ENST00000364121 118 ntBASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA67.7-201ENST00000516664 135 ntBASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU6-1116P-201ENST00000517269 99 ntBASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA11Q9Y5H2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 MIRLET7C-201ENST00000362160 84 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-34-201ENST00000362441 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-12-201ENST00000362583 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RNA5SP119-201ENST00000362715 117 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-29-201ENST00000362834 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-9-201ENST00000362912 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-21-201ENST00000362963 81 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 Y_RNA.78-201ENST00000362970 110 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-14-201ENST00000363090 81 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-13-201ENST00000363358 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU6-833P-201ENST00000363486 107 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-41-201ENST00000363608 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-11-201ENST00000363616 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-5-201ENST00000363633 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-39-201ENST00000363694 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-4-201ENST00000363810 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-16-201ENST00000363887 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-6-201ENST00000363942 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-42-201ENST00000364273 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-15-201ENST00000364809 81 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-1-201ENST00000364961 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-26-201ENST00000365067 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-10-201ENST00000365073 81 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-43-201ENST00000365503 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-36-201ENST00000365629 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RNU11-3P-201ENST00000391111 133 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 BX510359.4-201ENST00000423750 193 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA31.10-201ENST00000516482 106 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORD115-40-201ENST00000606510 82 ntBASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA11Q9Y5H2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 MIR1267-201ENST00000408723 78 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 SNORA84-201ENST00000459229 133 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 RNA5SP137-201ENST00000516833 135 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 IGLV3-17-201ENST00000519099 244 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 AC022202.1-201ENST00000613515 211 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 Y_RNA.818-201ENST00000618813 71 ntBASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA11Q9Y5H2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHGA11Q9Y5H2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
PCDHGA11Q9Y5H2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU6-640P-201ENST00000363693 105 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 SNORA1.2-201ENST00000365189 134 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 Y_RNA.344-201ENST00000365381 112 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU6-1104P-201ENST00000384723 104 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 MT-TI-201ENST00000387365 69 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 AL022718.1-201ENST00000412004 84 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms