Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PKP3Q9Y446 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 RNA5SP482-201ENST00000391269 118 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 AL034345.1-201ENST00000407768 123 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.81□□□□□ -2.12
PKP3Q9Y446 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.81□□□□□ -2.12
PKP3Q9Y446 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.81□□□□□ -2.12
PKP3Q9Y446 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 AC100767.1-201ENST00000528178 123 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 MIR2681-201ENST00000581814 105 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 AL365265.1-201ENST00000621045 234 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKP3Q9Y446 AC068700.1-201ENST00000565862 3754 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PKP3Q9Y446 Y_RNA.253-201ENST00000364562 112 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 RNY4P28-201ENST00000365281 93 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 MIR526A2-201ENST00000390198 65 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 RNU6-360P-201ENST00000390944 104 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 MIR1298-201ENST00000408783 112 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 RNU6-847P-201ENST00000411115 108 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.8□□□□□ -2.12
PKP3Q9Y446 FTH1P12-201ENST00000432137 551 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
PKP3Q9Y446 COX6CP14-201ENST00000469580 174 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 MIR3671-201ENST00000580455 88 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 AC009779.6-201ENST00000603972 165 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 AC011921.3-201ENST00000605540 361 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 JPX_2.1-201ENST00000614161 69 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 AL591926.4-201ENST00000616895 298 ntBASIC1.8□□□□□ -2.12
PKP3Q9Y446 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PKP3Q9Y446 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
PKP3Q9Y446 Y_RNA.200-201ENST00000364018 102 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 RNU4-10P-201ENST00000364383 140 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 RNU4-41P-201ENST00000364426 143 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 RNU6-1031P-201ENST00000384773 107 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PKP3Q9Y446 SNORA11.2-201ENST00000408318 127 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 MIR1261-201ENST00000408659 82 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 RNU6-383P-201ENST00000410864 94 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 Y_RNA.626-201ENST00000411288 95 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 snoU13.26-201ENST00000459452 105 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.79□□□□□ -2.12
PKP3Q9Y446 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKP3Q9Y446 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PKP3Q9Y446 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 SNORD68-201ENST00000363214 84 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 Y_RNA.199-201ENST00000364014 102 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 Y_RNA.257-201ENST00000364596 102 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 U8.13-201ENST00000390842 128 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 SNRPGP10-201ENST00000432323 225 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 MIR5688-201ENST00000580619 83 ntBASIC1.78□□□□□ -2.12
PKP3Q9Y446 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PKP3Q9Y446 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PKP3Q9Y446 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 Y_RNA.24-201ENST00000362508 103 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RNU6-653P-201ENST00000363074 106 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RNU6-1209P-201ENST00000363655 107 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 Y_RNA.796-201ENST00000364268 102 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 Y_RNA.799-201ENST00000364992 102 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RNU6-969P-201ENST00000383900 105 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 MIR626-201ENST00000385032 94 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 MIR1278-201ENST00000408753 81 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.77□□□□□ -2.13
PKP3Q9Y446 OR9P1P-201ENST00000496431 281 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 Y_RNA.714-201ENST00000517065 90 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 RPL23AP91-201ENST00000569211 455 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 AC090425.1-201ENST00000610007 140 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 AC021506.2-201ENST00000612354 169 ntBASIC1.77□□□□□ -2.13
PKP3Q9Y446 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
PKP3Q9Y446 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PKP3Q9Y446 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PKP3Q9Y446 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PKP3Q9Y446 Y_RNA.83-201ENST00000363005 113 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 RNU4-17P-201ENST00000365598 141 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 SNORA12.1-201ENST00000390873 148 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 MLLT10P1-201ENST00000418346 262 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 Z98949.2-201ENST00000440996 144 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 AC130289.1-201ENST00000577321 73 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 AC084768.2-201ENST00000622736 221 ntBASIC1.76□□□□□ -2.13
PKP3Q9Y446 MIR411-201ENST00000362239 96 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 U8.5-201ENST00000364528 136 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 Y_RNA.308-201ENST00000365043 101 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 RNU6-1318P-201ENST00000365389 103 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 RNU6-131P-201ENST00000391144 107 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms