Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-442P-201ENST00000383968 104 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-1040P-201ENST00000383974 107 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.462-201ENST00000384268 102 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-482P-201ENST00000391068 107 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AL590004.1-201ENST00000405321 300 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AF228730.4-201ENST00000421457 183 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU7-115P-201ENST00000516433 55 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AC024405.2-202ENST00000532731 184 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AC093027.1-201ENST00000546698 429 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AC015712.3-201ENST00000559380 164 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AC127455.1-201ENST00000565496 145 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 MIR5188-201ENST00000583467 113 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 JPX_2.1-201ENST00000614161 69 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 AC091925.1-201ENST00000623204 462 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 MIR4272-201ENST00000635924 64 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.259-201ENST00000364619 101 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 SNORD116-29-201ENST00000384516 83 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 RNY4P36-201ENST00000391116 96 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 MTCO2P27-201ENST00000420740 428 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 AC098614.3-201ENST00000438957 440 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 snoU13.23-201ENST00000458863 104 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 AL355375.2-201ENST00000574825 175 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 AC005730.3-201ENST00000583067 366 ntBASIC0.5□□□□□ -2.33
KCNIP3Q9Y2W7 SNORD81.1-201ENST00000363064 77 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.796-201ENST00000364268 102 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.799-201ENST00000364992 102 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.331-201ENST00000365267 102 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.387-201ENST00000383918 102 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.505-201ENST00000384489 102 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.619-201ENST00000410951 90 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 AC024067.1-201ENST00000426199 223 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 AC005534.2-201ENST00000431047 433 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RPL23AP54-201ENST00000495129 419 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-277P-201ENST00000516272 106 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 SNORA20.3-201ENST00000516880 132 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 DEFB117-201ENST00000602356 141 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 AL355073.2-201ENST00000612106 557 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 MIR548AY-201ENST00000617669 107 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 MTND4LP32-201ENST00000636111 270 ntBASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-1209P-201ENST00000363655 107 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.463-201ENST00000384271 102 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 SNORA2B-201ENST00000384583 137 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 MIR764-201ENST00000390811 85 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 MIR2115-201ENST00000516657 100 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 AC008507.4-201ENST00000585464 127 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.772-201ENST00000606692 102 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 Pinc.1-201ENST00000616452 154 ntBASIC0.48□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.140-201ENST00000363474 103 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-268P-201ENST00000364174 107 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 U8.7-201ENST00000364940 136 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.428-201ENST00000384078 102 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RNA5SP95-201ENST00000410319 137 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 AC138393.2-201ENST00000414742 246 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 AC092473.1-201ENST00000441098 221 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 HMGN1P10-201ENST00000474557 553 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RN7SL429P-201ENST00000479090 223 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RN7SL489P-201ENST00000486185 223 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RN7SL327P-201ENST00000488659 223 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.718-201ENST00000517110 102 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RN7SL853P-201ENST00000617250 223 ntBASIC0.47□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 MIR520E-201ENST00000384867 87 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 MIR802-201ENST00000390235 94 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 U8.17-201ENST00000391292 132 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 RNU7-152P-201ENST00000458982 64 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 SNORD116.3-201ENST00000517176 78 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 MIR2681-201ENST00000581814 105 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 AC136443.5-201ENST00000603741 370 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 AC104695.3-201ENST00000604052 296 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 AC011373.1-201ENST00000607270 237 ntBASIC0.46□□□□□ -2.34
KCNIP3Q9Y2W7 MIR377-201ENST00000362145 69 ntBASIC0.45□□□□□ -2.34
KCNIP3Q9Y2W7 RNU6-1115P-201ENST00000362490 106 ntBASIC0.45□□□□□ -2.34
KCNIP3Q9Y2W7 RNU6-396P-201ENST00000365369 105 ntBASIC0.45□□□□□ -2.34
KCNIP3Q9Y2W7 Y_RNA.458-201ENST00000384240 102 ntBASIC0.45□□□□□ -2.34
KCNIP3Q9Y2W7 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
KCNIP3Q9Y2W7 AL121655.1-201ENST00000605811 308 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms