Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 AC026241.1-201ENST00000517873 2142 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 snoU2_19.1-201ENST00000362361 80 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 MIR300-201ENST00000401138 83 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 AC016909.1-201ENST00000415916 166 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 RPS27P29-201ENST00000463110 252 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 AC008885.1-201ENST00000514930 301 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 RNA5SP217-201ENST00000515959 91 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 RNU5F-4P-201ENST00000516581 114 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 AC103810.7-201ENST00000607821 91 ntBASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 SNORD32B-201ENST00000364460 84 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 RNU4-16P-201ENST00000364737 141 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.440-201ENST00000384120 114 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 AL512326.2-201ENST00000426359 151 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 SNORD36C-201ENST00000516733 66 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-1096P-201ENST00000517089 102 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 MIR4753-201ENST00000585119 83 ntBASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.02□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-1210P-201ENST00000363775 107 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.253-201ENST00000364562 112 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 MIR548O-201ENST00000408583 114 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 AC006483.1-201ENST00000487308 313 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 AC004812.1-201ENST00000540773 146 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 MIR2682-201ENST00000580305 110 ntBASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDZRN3Q9UPQ7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.205-201ENST00000364128 113 ntBASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 SNORA48.8-201ENST00000391324 134 ntBASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PDZRN3Q9UPQ7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.37-201ENST00000362606 108 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-655P-201ENST00000362858 107 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 SNORA71.1-201ENST00000364523 117 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 RNA5SP126-201ENST00000365092 109 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 RN7SKP220-201ENST00000410611 288 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 RNA5SP144-201ENST00000410846 116 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.621-201ENST00000411065 96 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AC099677.2-201ENST00000436385 175 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 MIR3134-201ENST00000579433 74 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 MIR4438-201ENST00000585271 93 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AC002984.1-201ENST00000591692 448 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AC096720.1-201ENST00000604441 183 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 MIR6076-201ENST00000617521 113 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AC091932.4-201ENST00000623386 200 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 MIR3199-2-201ENST00000636243 86 ntBASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.99□□□□□ -1.77
PDZRN3Q9UPQ7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.57-201ENST00000362806 113 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-478P-201ENST00000363904 110 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 Y_RNA.351-201ENST00000365436 96 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 MIR519C-201ENST00000385053 87 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 RNU7-14P-201ENST00000459331 62 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 SNORA31.1-201ENST00000515993 133 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 SNORA31.5-201ENST00000516190 133 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 AC245166.1-201ENST00000521012 253 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 MIR376B-201ENST00000614515 100 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 ZNF271P-202ENST00000465539 1970 ntBASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDZRN3Q9UPQ7 AC018630.2-201ENST00000534866 2403 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-1313P-201ENST00000362622 102 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 RNU6-748P-201ENST00000384648 107 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 RNA5SP356-201ENST00000515972 94 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 MIR3945-201ENST00000581853 98 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 UBL5P2-201ENST00000583788 219 ntBASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PDZRN3Q9UPQ7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PDZRN3Q9UPQ7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-1094P-201ENST00000362416 104 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 SNORD115-28-201ENST00000363931 81 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-129P-201ENST00000391022 107 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA40.18-201ENST00000391200 128 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 AL161932.1-201ENST00000437408 146 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 RPS29P21-201ENST00000496272 170 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 RNU7-25P-201ENST00000516544 62 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 MIR4778-201ENST00000577635 80 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms