Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF346Q9UL40 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 Y_RNA.638-201ENST00000459374 113 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 Y_RNA.720-201ENST00000517166 92 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF346Q9UL40 AP003733.2-201ENST00000529409 171 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 AC127455.1-201ENST00000565496 145 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
ZNF346Q9UL40 Y_RNA.26-201ENST00000362539 101 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 RNU6-801P-201ENST00000364087 105 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.541-201ENST00000384640 113 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.569-201ENST00000384749 103 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 RPL21P38-201ENST00000418090 167 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 RNA5SP168-201ENST00000516642 112 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 MIR3145-201ENST00000580727 82 ntBASIC1.21□□□□□ -2.22
ZNF346Q9UL40 UBE2WP1-201ENST00000362030 340 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR26B-201ENST00000362251 77 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 RNU6-833P-201ENST00000363486 107 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 SNORA7.1-201ENST00000363750 139 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 RNU6-674P-201ENST00000363831 107 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.253-201ENST00000364562 112 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 RNU6-806P-201ENST00000365147 105 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR606-201ENST00000384851 96 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 U8.16-201ENST00000391279 133 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.602-201ENST00000410535 92 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 CALM2P4-201ENST00000430810 426 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MTND5P22-201ENST00000458380 195 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 RNU2-31P-201ENST00000516954 155 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 AC024405.2-202ENST00000532731 184 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR4498-201ENST00000577599 66 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 AL591926.4-201ENST00000616895 298 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 MIR548AY-201ENST00000617669 107 ntBASIC1.2□□□□□ -2.22
ZNF346Q9UL40 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.84-201ENST00000363011 104 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 RNA5SP259-201ENST00000365541 109 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 RNU6-1080P-201ENST00000383982 107 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 RNU6-136P-201ENST00000384663 107 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 RNU6-1203P-201ENST00000410703 110 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AC098869.1-201ENST00000481627 292 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 CYCTP-201ENST00000504253 315 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 RNY3P15-201ENST00000516297 97 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AL117187.1-201ENST00000555482 181 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AC008269.2-201ENST00000561915 1105 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 POLR3GP1-201ENST00000594073 261 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 AL365434.2-201ENST00000607979 234 ntBASIC1.19□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.64-201ENST00000362845 102 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 MIR522-201ENST00000385071 87 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ZNF346Q9UL40 SNORA53-201ENST00000391141 249 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC233266.1-201ENST00000454518 96 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 HMGN1P7-201ENST00000491722 313 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC087685.1-201ENST00000587507 141 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC120024.3-201ENST00000603167 156 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC242852.1-201ENST00000612151 96 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC244015.1-201ENST00000622301 99 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 SNORD3E-202ENST00000627253 216 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
ZNF346Q9UL40 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
ZNF346Q9UL40 AL391987.6-201ENST00000305671 199 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 MIR335-201ENST00000362173 94 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.217-201ENST00000364214 105 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 U8.7-201ENST00000364940 136 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 SNORA26.5-201ENST00000391215 123 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 RNU7-141P-201ENST00000459304 62 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.641-201ENST00000459414 105 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 SERF1AP1-201ENST00000514575 187 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 CYP3A52P-201ENST00000563326 91 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 AL513534.2-201ENST00000603836 250 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 AP001282.2-201ENST00000616149 309 ntBASIC1.17□□□□□ -2.22
ZNF346Q9UL40 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF346Q9UL40 RNU6-1272P-201ENST00000362776 107 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 RNU6-899P-201ENST00000363947 107 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 Y_RNA.203-201ENST00000364106 102 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 RNU2-14P-201ENST00000411053 191 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF346Q9UL40 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF346Q9UL40 AL358176.2-201ENST00000425769 204 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 AC091959.1-201ENST00000495857 238 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 RNU6-1338P-201ENST00000516328 91 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 SNORA27.4-201ENST00000516650 95 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 SUMO2P16-201ENST00000519475 264 ntBASIC1.16□□□□□ -2.22
ZNF346Q9UL40 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms