Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 HMGN2P32-201ENST00000444648 269 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.632-201ENST00000459189 102 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RPS26P48-201ENST00000491713 339 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 SNORD45.4-201ENST00000516629 73 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RPS29P30-201ENST00000600975 111 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1323P-201ENST00000384025 107 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 RNU6-42P-201ENST00000384165 107 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 RNU7-21P-201ENST00000459430 62 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 SNORD19B-201ENST00000459623 84 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 AC091951.2-201ENST00000500762 203 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 RNU7-116P-201ENST00000516940 62 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 SNORA74.3-201ENST00000517108 154 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 MIR4423-201ENST00000580922 80 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 MIR3192-201ENST00000584920 77 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
CLCF1Q9UBD9 RNU6-1115P-201ENST00000362490 106 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.331-201ENST00000365267 102 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 Y_RNA.341-201ENST00000365341 102 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 RNU6-969P-201ENST00000383900 105 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 MIR520C-201ENST00000385005 87 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 MIR516B2-201ENST00000385190 85 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 SNRPGP10-201ENST00000432323 225 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 AC092447.9-201ENST00000603395 144 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 MIR6734-201ENST00000621166 68 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 AC091925.1-201ENST00000623204 462 ntBASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CLCF1Q9UBD9 RNU1-115P-201ENST00000365329 160 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.368-201ENST00000365547 113 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 SNORD14.1-201ENST00000365609 90 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.456-201ENST00000384232 111 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 RNU6-1009P-201ENST00000390996 107 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.661-201ENST00000516003 99 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 RNU6-875P-201ENST00000516488 106 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 SNORA40.14-201ENST00000516543 86 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.713-201ENST00000517013 96 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 MIR5188-201ENST00000583467 113 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 POLR3GP1-201ENST00000594073 261 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AL121655.1-201ENST00000605811 308 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AL020996.3-201ENST00000606617 222 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AC011373.1-201ENST00000607270 237 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 AC007742.2-201ENST00000618226 398 ntBASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.71□□□□□ -2.3
CLCF1Q9UBD9 RNA5SP264-201ENST00000363115 107 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.252-201ENST00000364556 101 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.263-201ENST00000364659 114 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.310-201ENST00000365063 113 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.458-201ENST00000384240 102 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.496-201ENST00000384444 101 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.526-201ENST00000384572 110 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 MIR489-201ENST00000384923 84 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 AL160004.2-201ENST00000432935 350 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 snoU13.25-201ENST00000458945 104 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 RNU6-976P-201ENST00000516086 111 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 RNU7-43P-201ENST00000516554 64 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 RNU4-77P-201ENST00000516692 156 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 SNORA18.7-201ENST00000516910 131 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 MIR7111-201ENST00000619751 72 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 AL606534.2-204ENST00000635008 178 ntBASIC0.7□□□□□ -2.3
CLCF1Q9UBD9 SNORD50B-201ENST00000364995 70 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.356-201ENST00000365475 113 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.529-201ENST00000384586 119 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 RNU7-110P-201ENST00000516891 62 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 MIR4764-201ENST00000580680 88 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 AC104985.2-201ENST00000620598 500 ntBASIC0.69□□□□□ -2.3
CLCF1Q9UBD9 MIR103A2-201ENST00000362154 78 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.303-201ENST00000364998 94 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 Y_RNA.439-201ENST00000384119 94 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 SNORD63-201ENST00000384262 68 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 MTND5P20-201ENST00000448677 143 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 U8.20-201ENST00000459445 131 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
CLCF1Q9UBD9 AC087685.1-201ENST00000587507 141 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms