Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 Y_RNA.329-201ENST00000365209 107 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 SNORA72-201ENST00000384339 132 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 RNU6-855P-201ENST00000410395 104 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 Y_RNA.599-201ENST00000410489 109 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 SNRPGP10-201ENST00000432323 225 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 AC117454.1-201ENST00000491120 168 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 MTND4LP32-201ENST00000636111 270 ntBASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HMG20BQ9P0W2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.27-201ENST00000362540 103 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.146-201ENST00000363549 102 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 AC117470.1-201ENST00000381974 330 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 MIR7-2-201ENST00000384970 110 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 MIR15B-201ENST00000385045 98 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RNU6-710P-201ENST00000410424 105 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RNU6-966P-201ENST00000516479 104 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RNU6-911P-201ENST00000516523 104 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RNU6-699P-201ENST00000517081 110 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 RN7SKP295-201ENST00000517264 153 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 AC022441.3-201ENST00000605737 136 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 U6.92-201ENST00000636464 89 ntBASIC0.83□□□□□ -2.28
HMG20BQ9P0W2 SNORD50B-201ENST00000364995 70 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 RNU6-1175P-201ENST00000365200 107 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 MCFD2P1-201ENST00000417812 300 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 HMGN2P32-201ENST00000444648 269 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 RNU7-41P-201ENST00000515917 61 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 AC136628.3-201ENST00000521868 290 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 AC023827.1-201ENST00000569247 97 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 AC006600.1-201ENST00000572529 153 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 MIR4764-201ENST00000580680 88 ntBASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.82□□□□□ -2.28
HMG20BQ9P0W2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.384-201ENST00000383909 102 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.387-201ENST00000383918 102 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 MIR559-201ENST00000385188 96 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 AC005042.3-201ENST00000453230 174 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 VN1R91P-201ENST00000594377 169 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 AL355073.2-201ENST00000612106 557 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 SEPT14P17-201ENST00000617978 177 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 AC138305.3-201ENST00000624988 240 ntBASIC0.81□□□□□ -2.28
HMG20BQ9P0W2 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.341-201ENST00000365341 102 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 RNU7-43P-201ENST00000516554 64 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 AC023934.1-201ENST00000574529 2389 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 AL442644.1-201ENST00000454390 3105 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 AC068700.1-201ENST00000565862 3754 ntBASIC0.8□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.428-201ENST00000384078 102 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.505-201ENST00000384489 102 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 AC138393.2-201ENST00000414742 246 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 SNORD123-201ENST00000459473 70 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 SNORA20.3-201ENST00000516880 132 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 AC131055.1-201ENST00000584626 316 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 POLR3GP1-201ENST00000594073 261 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.142-201ENST00000363491 102 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 RNA5SP48-201ENST00000363969 126 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 SNORD14E-201ENST00000364009 85 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 RNY4P36-201ENST00000391116 96 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 MIR1185-1-201ENST00000408598 86 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AC024067.1-201ENST00000426199 223 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 RNU7-116P-201ENST00000516940 62 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 SNORD116.3-201ENST00000517176 78 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AP003716.2-201ENST00000528260 108 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AC109810.1-201ENST00000534066 224 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AL512605.2-201ENST00000592972 256 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 AC084781.2-201ENST00000615568 161 ntBASIC0.78□□□□□ -2.28
HMG20BQ9P0W2 Y_RNA.331-201ENST00000365267 102 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 RNU6-1040P-201ENST00000383974 107 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 Y_RNA.570-201ENST00000384750 101 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 AC005730.3-201ENST00000583067 366 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 MIR1302-1-201ENST00000637932 143 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 AC099654.14-201ENST00000638599 341 ntBASIC0.77□□□□□ -2.29
HMG20BQ9P0W2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
HMG20BQ9P0W2 SNORD116-29-201ENST00000384516 83 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms