Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 POLR3GP1-201ENST00000594073 261 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AP003357.1-201ENST00000604497 148 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AL121890.5-201ENST00000620848 304 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC106754.2-201ENST00000623006 233 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HACD3Q9P035 Y_RNA.140-201ENST00000363474 103 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU6-1048P-201ENST00000364054 107 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 Y_RNA.253-201ENST00000364562 112 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 SNORA72.4-201ENST00000384174 132 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU6-1011P-201ENST00000384668 107 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 SNORA26.5-201ENST00000391215 123 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU2-14P-201ENST00000411053 191 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 AL731563.1-201ENST00000442202 214 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 AC092991.1-201ENST00000477176 376 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU7-12P-201ENST00000516030 62 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU6-1143P-201ENST00000516125 104 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 RNU7-116P-201ENST00000516940 62 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.27□□□□□ -2.21
HACD3Q9P035 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 MIR4762-201ENST00000585261 75 ntBASIC1.27□□□□□ -2.21
HACD3Q9P035 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.27□□□□□ -2.21
HACD3Q9P035 SNORD68-201ENST00000363214 84 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 U8.5-201ENST00000364528 136 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RNU6-1160P-201ENST00000384546 104 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RNU6-1248P-201ENST00000391096 64 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RNU6-1109P-201ENST00000391187 107 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 SNX2P2-201ENST00000424553 323 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RPL39P38-201ENST00000467018 153 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RNU6-237P-201ENST00000515985 71 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 RNA5SP458-201ENST00000516188 119 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 AC127455.1-201ENST00000565496 145 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.812-201ENST00000610788 101 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.784-201ENST00000613803 101 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.787-201ENST00000616522 101 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.780-201ENST00000617336 101 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 MIR548AY-201ENST00000617669 107 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.801-201ENST00000619005 101 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.26□□□□□ -2.21
HACD3Q9P035 Y_RNA.16-201ENST00000362421 102 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 RNU6-199P-201ENST00000362954 107 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 Y_RNA.84-201ENST00000363011 104 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 SNORA63-201ENST00000363450 132 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 RNU6-1105P-201ENST00000384774 107 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 MIR522-201ENST00000385071 87 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
HACD3Q9P035 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
HACD3Q9P035 MTND5P22-201ENST00000458380 195 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 RNU7-141P-201ENST00000459304 62 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.25□□□□□ -2.21
HACD3Q9P035 AL442663.2-201ENST00000554385 511 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 AC006504.6-201ENST00000590142 199 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 AC120024.3-201ENST00000603167 156 ntBASIC1.25□□□□□ -2.21
HACD3Q9P035 AC134026.1-201ENST00000623249 2239 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RNU6-833P-201ENST00000363486 107 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 SNORA63C-201ENST00000364578 129 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RNU6-326P-201ENST00000365480 107 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RNU6-1065P-201ENST00000384513 106 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 MIR606-201ENST00000384851 96 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 PIGPP3-201ENST00000425307 415 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 DYNLT3P2-201ENST00000442517 295 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 U8.19-201ENST00000459095 133 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 MTATP8P1-201ENST00000467115 207 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RPL23AP54-201ENST00000495129 419 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 CYCTP-201ENST00000504253 315 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 AC114811.1-201ENST00000507207 168 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RNU6-917P-201ENST00000516294 104 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 RNU2-31P-201ENST00000516954 155 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 Y_RNA.720-201ENST00000517166 92 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 AL512310.8-201ENST00000550183 120 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 AC027279.3-201ENST00000625055 122 ntBASIC1.24□□□□□ -2.21
HACD3Q9P035 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.24□□□□□ -2.21
HACD3Q9P035 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HACD3Q9P035 Y_RNA.203-201ENST00000364106 102 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 RNU6-163P-201ENST00000384396 106 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 RNU6-763P-201ENST00000390865 106 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 RPS29P28-201ENST00000446439 141 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 MIR3664-201ENST00000579074 99 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.23□□□□□ -2.21
HACD3Q9P035 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
HACD3Q9P035 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
HACD3Q9P035 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
HACD3Q9P035 Y_RNA.512-201ENST00000384518 102 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 MIR891A-201ENST00000401237 79 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 SNORA36B-201ENST00000410438 131 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 MLLT10P1-201ENST00000418346 262 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 SNRPGP10-201ENST00000432323 225 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 Y_RNA.637-201ENST00000459424 114 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 AC091959.1-201ENST00000495857 238 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
HACD3Q9P035 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms