Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 JPX_2.1-201ENST00000614161 69 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 AC015726.2-201ENST00000620112 122 ntBASIC0.25□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.339-201ENST00000365325 102 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 RNU6-20P-201ENST00000384106 107 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.577-201ENST00000384794 101 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 MIR520F-201ENST00000384824 87 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 SNORD78.2-201ENST00000391076 69 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 RNU6-1199P-201ENST00000411249 104 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.24□□□□□ -2.37
CLN6Q9NWW5 Z83846.1-201ENST00000446798 265 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 AC092989.1-201ENST00000481235 277 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 RNU6-977P-201ENST00000516411 103 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 EIF1P4-201ENST00000572664 335 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 Pinc.1-201ENST00000616452 154 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 AC087588.2-201ENST00000617667 426 ntBASIC0.24□□□□□ -2.37
CLN6Q9NWW5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CLN6Q9NWW5 RNU6-626P-201ENST00000363354 107 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 RNU6-710P-201ENST00000410424 105 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 MTCO2P27-201ENST00000420740 428 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 PRDX4P1-201ENST00000507189 574 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 RNU7-116P-201ENST00000516940 62 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 MIR4452-201ENST00000583004 71 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 AP000753.3-201ENST00000604083 169 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 AC243829.3-201ENST00000622177 108 ntBASIC0.23□□□□□ -2.37
CLN6Q9NWW5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
CLN6Q9NWW5 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-369P-201ENST00000362515 102 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.146-201ENST00000363549 102 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.203-201ENST00000364106 102 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 Y_RNA.436-201ENST00000384097 102 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNY3P4-201ENST00000384428 101 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 MT-TN-201ENST00000387400 73 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 U8.17-201ENST00000391292 132 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-1156P-201ENST00000410365 100 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RPL30P15-201ENST00000457129 321 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-830P-201ENST00000516353 107 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-720P-201ENST00000516363 108 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-264P-201ENST00000517134 104 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 AC060780.3-201ENST00000589464 80 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 POLR3GP1-201ENST00000594073 261 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 AL669831.3-213ENST00000636676 183 ntBASIC0.22□□□□□ -2.37
CLN6Q9NWW5 RNU6-934P-201ENST00000365154 107 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.329-201ENST00000365209 107 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RNU6-1323P-201ENST00000384025 107 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 HMGN1P10-201ENST00000474557 553 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.21□□□□□ -2.38
CLN6Q9NWW5 SCARNA8-201ENST00000515924 131 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RNU6-496P-201ENST00000516145 99 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RNU7-4P-201ENST00000516961 62 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RNU6-1213P-201ENST00000517075 94 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 AC144568.1-201ENST00000520139 137 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 MIR3612-201ENST00000579753 87 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 MIR548AO-201ENST00000579992 96 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 RBM11P1-201ENST00000604951 799 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 MIR8070-201ENST00000616510 88 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 AC092634.7-201ENST00000621022 103 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.3-201ENST00000362331 103 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.72-201ENST00000362894 103 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 SNORA25.9-201ENST00000365087 128 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.341-201ENST00000365341 102 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 RNU6-205P-201ENST00000390858 107 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CLN6Q9NWW5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 SNORD83.1-201ENST00000411362 77 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MCFD2P1-201ENST00000417812 300 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MTND1P2-201ENST00000430604 821 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MTCO3P10-201ENST00000455912 772 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 snoU13.21-201ENST00000459368 105 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.2□□□□□ -2.38
CLN6Q9NWW5 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 RNU6-470P-201ENST00000515954 104 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 RNU6-966P-201ENST00000516479 104 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MIR4771-2-201ENST00000577758 74 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MIR4771-1-201ENST00000582617 74 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 AC090517.2-201ENST00000614966 680 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 AC011476.5-201ENST00000615594 130 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 MTND1P7-201ENST00000632801 297 ntBASIC0.2□□□□□ -2.38
CLN6Q9NWW5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.2□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.230-201ENST00000364348 109 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 SNORA1.2-201ENST00000365189 134 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 Y_RNA.516-201ENST00000384541 124 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 MTCO2P33-201ENST00000402100 465 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.19□□□□□ -2.38
CLN6Q9NWW5 RNU7-169P-201ENST00000459456 61 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 RNU7-181P-201ENST00000517234 74 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 MIR4659A-201ENST00000580269 81 ntBASIC0.19□□□□□ -2.38
CLN6Q9NWW5 AC022441.3-201ENST00000605737 136 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms