Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 AC245047.8-201ENST00000456455 284 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 RNU7-34P-201ENST00000459394 64 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 RNU6-548P-201ENST00000517083 115 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 AC087685.1-201ENST00000587507 141 ntBASIC2.23□□□□□ -2.05
CCM2LQ9NUG4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 AC016717.2-201ENST00000609089 5141 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 MIR126-201ENST00000362291 85 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 MIR1278-201ENST00000408753 81 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 AC009310.1-201ENST00000414414 451 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 AL603825.1-201ENST00000438481 80 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 SNORD11-201ENST00000459124 84 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 SNORA31.10-201ENST00000516482 106 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 SNORA31.17-201ENST00000516953 127 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 MIR4709-201ENST00000577272 72 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 MIR4744-201ENST00000581563 82 ntBASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCM2LQ9NUG4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 U8.5-201ENST00000364528 136 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 SNORA4.2-201ENST00000365313 147 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 RNU6-131P-201ENST00000391144 107 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 RNA5SP212-201ENST00000391223 107 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 AC107393.1-201ENST00000512403 346 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 FTX_2.1-201ENST00000618816 94 ntBASIC2.21□□□□□ -2.06
CCM2LQ9NUG4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 SNORD68-201ENST00000363214 84 ntBASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 MIR4762-201ENST00000585261 75 ntBASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 uc_338.4-201ENST00000616635 176 ntBASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.2□□□□□ -2.06
CCM2LQ9NUG4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.555-201ENST00000384673 110 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 AL606845.1-201ENST00000404881 255 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 RNA5SP247-201ENST00000411181 105 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 OR9P1P-201ENST00000496431 281 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 SCARNA8-201ENST00000515924 131 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 AC022559.1-201ENST00000520905 205 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 AL049861.1-201ENST00000603130 150 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
CCM2LQ9NUG4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-275P-201ENST00000364910 107 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-728P-201ENST00000365375 104 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 MIR522-201ENST00000385071 87 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-578P-201ENST00000390980 103 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 MLLT10P1-201ENST00000418346 262 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 FTH1P12-201ENST00000432137 551 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-126P-201ENST00000516685 103 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-861P-201ENST00000516745 106 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-453P-201ENST00000516819 85 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 AC108706.1-201ENST00000611053 297 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 U6.106-201ENST00000636360 105 ntBASIC2.18□□□□□ -2.06
CCM2LQ9NUG4 RNU6-682P-201ENST00000363843 106 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 MT-TT-201ENST00000387460 66 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 SNORA12.1-201ENST00000390873 148 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 RNU6-360P-201ENST00000390944 104 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 RPL30P13-201ENST00000418873 348 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AC026436.1-201ENST00000510537 270 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 RNU6-1219P-201ENST00000516143 112 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 SNORD77.4-201ENST00000516158 81 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AC109810.1-201ENST00000534066 224 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 MRPS18CP4-201ENST00000535821 231 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 MIR4662B-201ENST00000579498 81 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 AL773524.1-201ENST00000614065 229 ntBASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCM2LQ9NUG4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms