Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNU4-50P-201ENST00000364361 141 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 RNU6-53P-201ENST00000365367 106 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 RNU6-937P-201ENST00000384325 106 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 RNU6-21P-201ENST00000384710 107 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 MIR520C-201ENST00000385005 87 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 MT-TD-201ENST00000387419 68 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.579-201ENST00000390939 94 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 COX6CP14-201ENST00000469580 174 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 RNU7-43P-201ENST00000516554 64 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC040926.1-201ENST00000530195 238 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC136932.1-201ENST00000574771 208 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 MIR4795-201ENST00000584182 89 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC087685.1-201ENST00000587507 141 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AL020996.3-201ENST00000606617 222 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 JPX_2.1-201ENST00000614161 69 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.804-201ENST00000615262 101 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 MIR548AY-201ENST00000617669 107 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 AC091895.1-201ENST00000624494 256 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.80-201ENST00000362996 102 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RNA5SP264-201ENST00000363115 107 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.485-201ENST00000384395 102 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RNU6-482P-201ENST00000391068 107 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RNU4-30P-201ENST00000410245 143 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 HMGN1P10-201ENST00000474557 553 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RPL23AP54-201ENST00000495129 419 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 PDCD5P2-201ENST00000507570 312 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RNU7-41P-201ENST00000515917 61 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RNU7-115P-201ENST00000516433 55 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 AP003716.2-201ENST00000528260 108 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 MIR4764-201ENST00000580680 88 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 MIR3145-201ENST00000580727 82 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 AC006157.1-201ENST00000611750 366 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 AC007742.2-201ENST00000618226 398 ntBASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 RNA5SP48-201ENST00000363969 126 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 SNORD14E-201ENST00000364009 85 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 SNORD123-201ENST00000459473 70 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 AP000942.3-201ENST00000603702 160 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 AL080274.1-201ENST00000605565 220 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 AL133255.1-201ENST00000606374 441 ntBASIC0.69□□□□□ -2.3
CCL28Q9NRJ3 U8.7-201ENST00000364940 136 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR532-201ENST00000385025 91 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR1302-11-201ENST00000408051 138 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR1302-9-201ENST00000408365 138 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR1302-10-201ENST00000408734 138 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 POLR2KP2-201ENST00000438155 177 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 RPL39P28-201ENST00000465655 155 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR4298-201ENST00000584380 73 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 MIR1302-2-201ENST00000607096 138 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 SNORD113-5-201ENST00000607261 78 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 PART1_1.1-201ENST00000611761 217 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 AC007485.1-201ENST00000616755 206 ntBASIC0.68□□□□□ -2.3
CCL28Q9NRJ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 SNORA25.3-201ENST00000363205 127 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 SNORD38C-201ENST00000384381 69 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 MIR1185-1-201ENST00000408598 86 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RNU6-130P-201ENST00000411112 103 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 AC010655.3-201ENST00000478818 450 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 SEPT14P8-201ENST00000508026 178 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RNU6-1170P-201ENST00000515974 106 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RN7SKP164-201ENST00000516138 266 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 MIR4781-201ENST00000585250 76 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 uc_338.22-201ENST00000622722 187 ntBASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL28Q9NRJ3 RNU4-80P-201ENST00000363200 141 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.395-201ENST00000383945 109 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6-442P-201ENST00000383968 104 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 MIR802-201ENST00000390235 94 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
CCL28Q9NRJ3 RNU6-437P-201ENST00000459408 95 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms