Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL078604.3-201ENST00000615580 211 ntBASIC1.68□□□□□ -2.14
PCDH9Q9HC56 AC078938.1-201ENST00000620993 318 ntBASIC1.68□□□□□ -2.14
PCDH9Q9HC56 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.68□□□□□ -2.14
PCDH9Q9HC56 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.68□□□□□ -2.14
PCDH9Q9HC56 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PCDH9Q9HC56 AC100821.1-201ENST00000523153 2479 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.82-201ENST00000363000 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.92-201ENST00000363043 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.235-201ENST00000364412 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.292-201ENST00000364904 97 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.306-201ENST00000365015 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.312-201ENST00000365089 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.322-201ENST00000365151 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 MIR1278-201ENST00000408753 81 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 RNU6-383P-201ENST00000410864 94 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 COX6CP10-201ENST00000416832 224 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 MLLT10P1-201ENST00000418346 262 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 STAG3L5P-204ENST00000443759 179 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.650-201ENST00000459002 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.638-201ENST00000459374 113 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 RNU7-34P-201ENST00000459394 64 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 SNORA31.10-201ENST00000516482 106 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.777-201ENST00000516982 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.771-201ENST00000598668 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 Y_RNA.789-201ENST00000622480 102 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 AC068700.1-201ENST00000565862 3754 ntBASIC1.67□□□□□ -2.14
PCDH9Q9HC56 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PCDH9Q9HC56 MIR562-201ENST00000384894 95 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 MT-TG-201ENST00000387429 68 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AP002004.2-201ENST00000531656 154 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 MIR4524B-201ENST00000581569 115 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AC090425.1-201ENST00000610007 140 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AL442067.1-201ENST00000613261 223 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 AC073349.3-201ENST00000617616 186 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
PCDH9Q9HC56 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
PCDH9Q9HC56 SNORD68-201ENST00000363214 84 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 RN7SKP200-201ENST00000410564 320 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.65□□□□□ -2.15
PCDH9Q9HC56 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 snoU13.27-201ENST00000459278 104 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 RNU6-437P-201ENST00000459408 95 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 RNY3P16-201ENST00000516338 101 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 MIR4709-201ENST00000577272 72 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 MIR4282-201ENST00000583613 67 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 AL365265.1-201ENST00000621045 234 ntBASIC1.65□□□□□ -2.15
PCDH9Q9HC56 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PCDH9Q9HC56 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PCDH9Q9HC56 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.24-201ENST00000362508 103 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.203-201ENST00000364106 102 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.572-201ENST00000384757 98 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 MIR764-201ENST00000390811 85 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 SNORA12.1-201ENST00000390873 148 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 RNU4-71P-201ENST00000516258 113 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 RNA5SP481-201ENST00000516814 122 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
PCDH9Q9HC56 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.64□□□□□ -2.15
PCDH9Q9HC56 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
PCDH9Q9HC56 MIR126-201ENST00000362291 85 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 MIR367-201ENST00000362299 68 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 RNU4-41P-201ENST00000364426 143 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 RNU6-144P-201ENST00000383951 107 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 RNU6-950P-201ENST00000384651 107 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 MIR4724-201ENST00000579485 89 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 JPX_2.1-201ENST00000614161 69 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 AL591926.4-201ENST00000616895 298 ntBASIC1.63□□□□□ -2.15
PCDH9Q9HC56 RNA5SP432-201ENST00000362480 116 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.199-201ENST00000364014 102 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.253-201ENST00000364562 112 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNU6-923P-201ENST00000364753 107 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.308-201ENST00000365043 101 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNY4P28-201ENST00000365281 93 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNU6-969P-201ENST00000383900 105 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.552-201ENST00000384665 112 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 AL034345.1-201ENST00000407768 123 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Z98949.2-201ENST00000440996 144 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 HMGN2P23-201ENST00000456759 269 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms