Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC024405.2-202ENST00000532731 184 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AC037487.3-201ENST00000606668 112 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 MIR6079-201ENST00000635807 62 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AC068647.2-201ENST00000637380 353 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC018630.2-201ENST00000534866 2403 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 RNA5SP99-201ENST00000364020 114 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 MTCO2P33-201ENST00000402100 465 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 HSPE1P9-201ENST00000440046 311 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC005357.1-201ENST00000588399 301 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AP003357.1-201ENST00000604497 148 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC005972.2-201ENST00000604690 348 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC069114.2-201ENST00000604699 304 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 BX284668.6-201ENST00000606899 438 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AC013791.1-201ENST00000616619 62 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.65-201ENST00000362846 100 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU1-17P-201ENST00000363022 152 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-653P-201ENST00000363074 106 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU4-10P-201ENST00000364383 140 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 SNORA20.1-201ENST00000364790 130 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNY4P28-201ENST00000365281 93 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.478-201ENST00000384358 107 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-376P-201ENST00000384731 106 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.572-201ENST00000384757 98 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 MIR515-2-201ENST00000384883 83 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 MIR515-1-201ENST00000384884 83 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU1-142P-201ENST00000516682 145 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 AC127455.1-201ENST00000565496 145 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 MIR3671-201ENST00000580455 88 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 MIR548AY-201ENST00000617669 107 ntBASIC1.65□□□□□ -2.15
UPF2Q9HAU5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
UPF2Q9HAU5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPF2Q9HAU5 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
UPF2Q9HAU5 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC015922.2-201ENST00000435593 184 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 SNORA31.17-201ENST00000516953 127 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC130289.1-201ENST00000577321 73 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 MIR5692C2-201ENST00000577959 77 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC009779.6-201ENST00000603972 165 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AL442067.1-201ENST00000613261 223 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 AC100821.1-201ENST00000523153 2479 ntBASIC1.64□□□□□ -2.15
UPF2Q9HAU5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
UPF2Q9HAU5 SNORA1B-201ENST00000362535 133 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.292-201ENST00000364904 97 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.476-201ENST00000384347 108 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNA5SP323-201ENST00000391094 133 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 AC024067.1-201ENST00000426199 223 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.638-201ENST00000459374 113 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNY3P16-201ENST00000516338 101 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNU6-341P-201ENST00000516973 96 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 AC100767.1-201ENST00000528178 123 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.63□□□□□ -2.15
UPF2Q9HAU5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.63□□□□□ -2.15
UPF2Q9HAU5 POLR3GP1-201ENST00000594073 261 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.63□□□□□ -2.15
UPF2Q9HAU5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.63□□□□□ -2.15
UPF2Q9HAU5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UPF2Q9HAU5 RNU4-13P-201ENST00000364019 141 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.274-201ENST00000364714 101 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.304-201ENST00000365011 112 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.489-201ENST00000384410 101 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 MIR30A-201ENST00000385092 71 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 RNU6-482P-201ENST00000391068 107 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 MIR1278-201ENST00000408753 81 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 SNORA36B-201ENST00000410438 131 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.62□□□□□ -2.15
UPF2Q9HAU5 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 RNU6-237P-201ENST00000515985 71 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 AC011604.1-201ENST00000545978 196 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 AL365265.1-201ENST00000621045 234 ntBASIC1.62□□□□□ -2.15
UPF2Q9HAU5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.62□□□□□ -2.15
UPF2Q9HAU5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UPF2Q9HAU5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UPF2Q9HAU5 RNU6-899P-201ENST00000363947 107 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 SNORA72-201ENST00000384339 132 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms