Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 MIR452-201ENST00000385020 85 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 MIR522-201ENST00000385071 87 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 AC245047.8-201ENST00000456455 284 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 RNU7-21P-201ENST00000459430 62 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 AC006600.1-201ENST00000572529 153 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 AC005972.2-201ENST00000604690 348 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 AC022441.3-201ENST00000605737 136 ntBASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.87□□□□□ -2.27
RPAP3Q9H6T3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 RNY4P36-201ENST00000391116 96 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 AC022616.4-201ENST00000522985 181 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 AC005730.3-201ENST00000583067 366 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
RPAP3Q9H6T3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 MIR942-201ENST00000401111 86 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 RNU7-41P-201ENST00000515917 61 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 SNORD45.4-201ENST00000516629 73 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 SNORA18.7-201ENST00000516910 131 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 Y_RNA.718-201ENST00000517110 102 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 AC136628.3-201ENST00000521868 290 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 AC104985.2-201ENST00000620598 500 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 MIR1302-1-201ENST00000637932 143 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 AC023934.1-201ENST00000574529 2389 ntBASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPAP3Q9H6T3 AC117470.1-201ENST00000381974 330 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 MIR200A-201ENST00000384875 90 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 RNU6-855P-201ENST00000410395 104 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 AL606490.4-201ENST00000423117 127 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 RN7SKP295-201ENST00000517264 153 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 AC090142.3-201ENST00000519012 385 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 AC023827.1-201ENST00000569247 97 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 RN7SL793P-201ENST00000583259 296 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 VN1R91P-201ENST00000594377 169 ntBASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.84□□□□□ -2.27
RPAP3Q9H6T3 SNORD50B-201ENST00000364995 70 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 SNORA72-201ENST00000384339 132 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MIR520C-201ENST00000385005 87 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MIR136-201ENST00000385207 82 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 MCFD2P1-201ENST00000417812 300 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 SNRPGP10-201ENST00000432323 225 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 SNORA74.3-201ENST00000517108 154 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 AL132765.2-201ENST00000610812 351 ntBASIC0.83□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.80-201ENST00000362996 102 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 RNA5SP264-201ENST00000363115 107 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.485-201ENST00000384395 102 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AL590004.1-201ENST00000405321 300 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 MTND1P14-201ENST00000427400 950 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AC117454.1-201ENST00000491120 168 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AC004812.1-201ENST00000540773 146 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AL355375.2-201ENST00000574825 175 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 MIR3145-201ENST00000580727 82 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 UBE2V2P2-201ENST00000587677 504 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 RBM11P1-201ENST00000604951 799 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 AC122108.2-201ENST00000611946 526 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 MIR4272-201ENST00000635924 64 ntBASIC0.82□□□□□ -2.28
RPAP3Q9H6T3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.496-201ENST00000384444 101 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 RNU6-710P-201ENST00000410424 105 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 AC005042.3-201ENST00000453230 174 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.632-201ENST00000459189 102 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 AC082651.2-201ENST00000496833 166 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 RNU6-197P-201ENST00000516680 100 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 SNORD116.3-201ENST00000517176 78 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 DEFB117-201ENST00000602356 141 ntBASIC0.81□□□□□ -2.28
RPAP3Q9H6T3 MIR103A2-201ENST00000362154 78 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 RNY1P4-201ENST00000384595 115 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 RNU6-131P-201ENST00000391144 107 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 MTCO2P27-201ENST00000420740 428 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms