Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 MIR634-201ENST00000385208 97 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 SNORA12.1-201ENST00000390873 148 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 RNU6-381P-201ENST00000391259 108 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.27□□□□□ -2.05
PIF1Q9H611 RNA5SP320-201ENST00000516263 124 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PIF1Q9H611 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.27□□□□□ -2.05
PIF1Q9H611 ICE2P2-201ENST00000483823 2787 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 AC016717.2-201ENST00000609089 5141 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 WWP1P1-201ENST00000466609 2769 ntBASIC2.27□□□□□ -2.05
PIF1Q9H611 Y_RNA.7-201ENST00000362352 102 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 RNU6-199P-201ENST00000362954 107 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 RNU6-1020P-201ENST00000363684 107 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 RNU6-203P-201ENST00000384038 104 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 Y_RNA.435-201ENST00000384095 112 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 MIR196B-201ENST00000384852 84 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 MIR513A1-201ENST00000385138 129 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 MIR934-201ENST00000401241 83 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
PIF1Q9H611 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.26□□□□□ -2.05
PIF1Q9H611 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.26□□□□□ -2.05
PIF1Q9H611 Y_RNA.308-201ENST00000365043 101 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 Y_RNA.510-201ENST00000384511 114 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 MIR23A-201ENST00000385245 73 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 RNU6-322P-201ENST00000516010 103 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 SNORD77.4-201ENST00000516158 81 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 SNORA81.3-201ENST00000517283 198 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 DEFB122-202ENST00000569013 197 ntBASIC2.25□□□□□ -2.05
PIF1Q9H611 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
PIF1Q9H611 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PIF1Q9H611 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PIF1Q9H611 Y_RNA.29-201ENST00000362570 113 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 RNA5SP68-201ENST00000363885 119 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 SNORA79-201ENST00000408376 140 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 Y_RNA.793-201ENST00000411222 111 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.24□□□□□ -2.05
PIF1Q9H611 AC114811.1-201ENST00000507207 168 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
PIF1Q9H611 AC015688.6-201ENST00000577737 104 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 MIR4422-201ENST00000581938 83 ntBASIC2.24□□□□□ -2.05
PIF1Q9H611 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
PIF1Q9H611 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PIF1Q9H611 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PIF1Q9H611 RNU4-10P-201ENST00000364383 140 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 SNORD38C-201ENST00000384381 69 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 RNU4-70P-201ENST00000384579 139 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 MIR1278-201ENST00000408753 81 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 RNU2-64P-201ENST00000411315 191 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 Y_RNA.644-201ENST00000459006 113 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 NDUFA4P2-201ENST00000489989 244 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 RNY3P16-201ENST00000516338 101 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 Y_RNA.674-201ENST00000516362 113 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 RNU6-182P-201ENST00000516970 105 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.23□□□□□ -2.05
PIF1Q9H611 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.23□□□□□ -2.05
PIF1Q9H611 AL049861.1-201ENST00000603130 150 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 MIR6817-201ENST00000615588 66 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
PIF1Q9H611 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.23□□□□□ -2.05
PIF1Q9H611 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
PIF1Q9H611 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PIF1Q9H611 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PIF1Q9H611 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 RNU6-923P-201ENST00000364753 107 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 SNORD50B-201ENST00000364995 70 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 RNU6-728P-201ENST00000365375 104 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 SNORA2.2-201ENST00000365473 135 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 Y_RNA.785-201ENST00000384290 109 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 Y_RNA.587-201ENST00000391210 103 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 RN7SKP51-201ENST00000410781 304 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 RNU6-1299P-201ENST00000516316 100 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 RNU7-149P-201ENST00000516739 59 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.22□□□□□ -2.05
PIF1Q9H611 AL160236.1-201ENST00000556317 195 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 MIR4744-201ENST00000581563 82 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
PIF1Q9H611 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
PIF1Q9H611 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
PIF1Q9H611 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
PIF1Q9H611 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
PIF1Q9H611 AC068700.1-201ENST00000565862 3754 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
PIF1Q9H611 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 RNA5SP259-201ENST00000365541 109 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 RNU6-1065P-201ENST00000384513 106 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 PIGPP3-201ENST00000425307 415 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 HSPE1P24-201ENST00000450782 238 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 RNA5SP24-201ENST00000516478 95 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 RNA5SP153-201ENST00000516498 76 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 AC004792.1-201ENST00000614523 137 ntBASIC2.21□□□□□ -2.06
PIF1Q9H611 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 398.4 ms