Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 RNU6-21P-201ENST00000384710 107 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 MTND1P14-201ENST00000427400 950 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 HMGN1P10-201ENST00000474557 553 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 RNU6-917P-201ENST00000516294 104 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 RNU6-922P-201ENST00000516753 99 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 AL160236.1-201ENST00000556317 195 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 SNORD113-5-201ENST00000607261 78 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 AC007485.1-201ENST00000616755 206 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 AL160413.1-201ENST00000622780 310 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 AC090574.1-201ENST00000623186 233 ntBASIC1.09□□□□□ -2.23
CXXC4Q9H2H0 AC091812.1-201ENST00000432235 1948 ntBASIC1.09□□□□□ -2.24
CXXC4Q9H2H0 SNORD68-201ENST00000363214 84 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.445-201ENST00000384168 102 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 RNU6-163P-201ENST00000384396 106 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 MIR452-201ENST00000385020 85 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 AP003357.1-201ENST00000604497 148 ntBASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.08□□□□□ -2.24
CXXC4Q9H2H0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 MIR369-201ENST00000362155 70 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.28-201ENST00000362554 111 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 RNU6-937P-201ENST00000384325 106 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 AC093850.1-201ENST00000454121 251 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 AC068338.1-201ENST00000565567 176 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 DEFB117-201ENST00000602356 141 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 AC007742.2-201ENST00000618226 398 ntBASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CXXC4Q9H2H0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.128-201ENST00000363391 112 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.419-201ENST00000384041 102 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 MIR522-201ENST00000385071 87 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 PMCHL1-202ENST00000423102 261 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 HMGN2P32-201ENST00000444648 269 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 AC068647.2-201ENST00000637380 353 ntBASIC1.06□□□□□ -2.24
CXXC4Q9H2H0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.380-201ENST00000365663 111 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 AC117470.1-201ENST00000381974 330 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 MIR15B-201ENST00000385045 98 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 RNU6-130P-201ENST00000411112 103 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 LINC01399-202ENST00000458450 244 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 AC114811.1-201ENST00000507207 168 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 RNU6-113P-201ENST00000516653 101 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 RNU6-988P-201ENST00000519081 107 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 RN7SL793P-201ENST00000583259 296 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 AC087685.1-201ENST00000587507 141 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 POLR3GP1-201ENST00000594073 261 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 AC124312.5-201ENST00000604451 268 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 PART1_1.1-201ENST00000611761 217 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 AC134503.1-201ENST00000633048 54 ntBASIC1.05□□□□□ -2.24
CXXC4Q9H2H0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.535-201ENST00000384612 99 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 RNU6-131P-201ENST00000391144 107 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 MIR1252-201ENST00000408861 65 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 AC015922.2-201ENST00000435593 184 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 POLR2KP2-201ENST00000438155 177 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 AC127455.1-201ENST00000565496 145 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.04□□□□□ -2.24
CXXC4Q9H2H0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.24
CXXC4Q9H2H0 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
CXXC4Q9H2H0 MIR526A1-201ENST00000384897 85 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms