Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6-1138P-201ENST00000365359 106 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 RNU6-147P-201ENST00000383983 107 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR548A1-201ENST00000385041 97 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 EDDM3CP-201ENST00000415977 425 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MRPS17P9-201ENST00000511924 393 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR4662B-201ENST00000579498 81 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF38Q9H0F5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF38Q9H0F5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
RNF38Q9H0F5 SNORA1-201ENST00000384107 130 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 MIR520G-201ENST00000385064 90 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.617-201ENST00000410920 90 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 AC063976.4-201ENST00000421971 163 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF38Q9H0F5 RNA5SP170-201ENST00000517150 101 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 MIR4679-2-201ENST00000578358 77 ntBASIC2.69□□□□□ -1.98
RNF38Q9H0F5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF38Q9H0F5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC245060.5-201ENST00000610778 3293 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 MIR624-201ENST00000385217 97 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 SNORD72-201ENST00000390994 80 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 RNA5SP467-201ENST00000391274 118 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 SNRPGP10-201ENST00000432323 225 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.651-201ENST00000459380 103 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC011406.1-201ENST00000512440 370 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 RNU6-1041P-201ENST00000516254 102 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC091178.2-201ENST00000584401 117 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC025166.1-201ENST00000612411 163 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 AC022202.1-201ENST00000613515 211 ntBASIC2.68□□□□□ -1.98
RNF38Q9H0F5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF38Q9H0F5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF38Q9H0F5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 MIR891A-201ENST00000401237 79 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF38Q9H0F5 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.649-201ENST00000459077 103 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 HMGN1P7-201ENST00000491722 313 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 RN7SKP19-201ENST00000516016 252 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 AL365205.2-201ENST00000594586 68 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 AC022217.4-201ENST00000604389 163 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF38Q9H0F5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF38Q9H0F5 AC008555.8-201ENST00000623602 2168 ntBASIC2.67□□□□□ -1.98
RNF38Q9H0F5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RNF38Q9H0F5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF38Q9H0F5 SNORD61-201ENST00000384252 73 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 MIR1263-201ENST00000408324 86 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 RNU6-1146P-201ENST00000516282 102 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 RNU6-504P-201ENST00000516568 104 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 RNU7-128P-201ENST00000517247 62 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF38Q9H0F5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF38Q9H0F5 AC007229.1-201ENST00000590455 412 ntBASIC2.66□□□□□ -1.98
RNF38Q9H0F5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF38Q9H0F5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.65□□□□□ -1.98
RNF38Q9H0F5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.98
RNF38Q9H0F5 ICE2P2-201ENST00000483823 2787 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 Y_RNA.43-201ENST00000362670 111 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 SNORA33-201ENST00000363664 130 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RNU1-96P-201ENST00000364163 162 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RNU1-52P-201ENST00000384190 164 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RN7SKP284-201ENST00000411002 343 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 AF228730.3-201ENST00000436691 102 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RNU7-99P-201ENST00000516271 62 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RNU6-126P-201ENST00000516685 103 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 RNA5SP137-201ENST00000516833 135 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 IGKV1-22-201ENST00000524313 326 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 AC010297.1-201ENST00000623948 149 ntBASIC2.65□□□□□ -1.99
RNF38Q9H0F5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF38Q9H0F5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF38Q9H0F5 SNORD115-3-201ENST00000363100 82 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 RNU6-1255P-201ENST00000363434 112 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms