Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 DEFB117-201ENST00000602356 141 ntBASIC1.49□□□□□ -2.17
ZNF541Q9H0D2 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
ZNF541Q9H0D2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.49□□□□□ -2.17
ZNF541Q9H0D2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.49□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.26-201ENST00000362539 101 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 SNORD68-201ENST00000363214 84 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 SNORD113-8-201ENST00000363497 74 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.183-201ENST00000363882 113 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU6-806P-201ENST00000365147 105 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU6-117P-201ENST00000365415 107 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.380-201ENST00000365663 111 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU6-639P-201ENST00000384074 107 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNA5SP482-201ENST00000391269 118 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU2-61P-201ENST00000411069 191 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 MLLT10P1-201ENST00000418346 262 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 ELOCP20-201ENST00000422460 345 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU7-12P-201ENST00000516030 62 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 RNU6-764P-201ENST00000516396 105 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 AC131281.1-201ENST00000522984 164 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 MIR4300-201ENST00000581016 96 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 AC091178.2-201ENST00000584401 117 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 AC068647.2-201ENST00000637380 353 ntBASIC1.48□□□□□ -2.17
ZNF541Q9H0D2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.172-201ENST00000363765 102 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.214-201ENST00000364201 112 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.286-201ENST00000364813 102 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 Y_RNA.383-201ENST00000383855 97 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 RNU6-338P-201ENST00000383888 105 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 SNORD116-13-201ENST00000384408 92 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 RNU6-1105P-201ENST00000384774 107 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 RNU6-1248P-201ENST00000391096 64 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 MIR3145-201ENST00000580727 82 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 RN7SL793P-201ENST00000583259 296 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 AC106754.2-201ENST00000623006 233 ntBASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
ZNF541Q9H0D2 RNU6-102P-201ENST00000384485 104 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 SNORD115-46-201ENST00000390982 71 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 AC098869.1-201ENST00000481627 292 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 RNA5SP168-201ENST00000516642 112 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 MIR4778-201ENST00000577635 80 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 AL355297.3-201ENST00000604082 446 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 AL360085.1-201ENST00000604713 532 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.812-201ENST00000610788 101 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.784-201ENST00000613803 101 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.787-201ENST00000616522 101 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.780-201ENST00000617336 101 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.801-201ENST00000619005 101 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 AL513423.1-201ENST00000621695 132 ntBASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.46□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.178-201ENST00000363832 102 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.210-201ENST00000364161 110 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 RNU4-41P-201ENST00000364426 143 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 MIR194-1-201ENST00000384892 85 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 AL135790.2-201ENST00000437701 267 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 RPS20P10-201ENST00000451209 253 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 AL358944.1-201ENST00000528537 144 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF541Q9H0D2 RNU6-1084P-201ENST00000362498 107 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.30-201ENST00000362572 97 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 SNORA63-201ENST00000363450 132 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 RNU6-770P-201ENST00000363929 105 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 SNORA63C-201ENST00000364578 129 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 RNU6-163P-201ENST00000384396 106 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 RNU6-1160P-201ENST00000384546 104 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 CALM2P4-201ENST00000430810 426 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 HSPE1P25-201ENST00000455484 251 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 LINC01399-202ENST00000458450 244 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 AC099513.1-201ENST00000490423 301 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 POLR3GP1-201ENST00000594073 261 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
ZNF541Q9H0D2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.64-201ENST00000362845 102 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.222-201ENST00000364264 102 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 MIR606-201ENST00000384851 96 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 MIR215-201ENST00000384858 110 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 MIR660-201ENST00000385235 97 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 U8.16-201ENST00000391279 133 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 RPL21P38-201ENST00000418090 167 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 RNU1-98P-201ENST00000458992 160 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 MRPS35P2-201ENST00000508242 191 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 RNU6-113P-201ENST00000516653 101 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 AL442663.2-201ENST00000554385 511 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 MIR5000-201ENST00000577717 103 ntBASIC1.43□□□□□ -2.18
ZNF541Q9H0D2 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms