Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 MIR5092-201ENST00000583139 88 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 AC025166.1-201ENST00000612411 163 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 SNORA50A-202ENST00000629536 136 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 MTND5P18-201ENST00000445624 1801 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 MAPK10-322ENST00000641485 4530 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 MIR520G-201ENST00000385064 90 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 MIR95-201ENST00000385072 81 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 RPS4XP11-201ENST00000446897 772 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 MRPS36P2-201ENST00000512569 299 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 AC011604.1-201ENST00000545978 196 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 PRELID2P1-201ENST00000552837 301 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNTNAP4Q9C0A0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-1107P-201ENST00000364817 104 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.549-201ENST00000384657 102 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 MIR624-201ENST00000385217 97 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 RNA5SP210-201ENST00000391034 120 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 RNU2-32P-201ENST00000411193 191 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 AC123900.1-201ENST00000420390 96 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 MTATP6P21-201ENST00000440681 189 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 SEM1P1-201ENST00000506694 209 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 Pinc.1-201ENST00000616452 154 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 U6.73-201ENST00000619194 103 ntBASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CNTNAP4Q9C0A0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.346-201ENST00000365385 112 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-756P-201ENST00000383997 107 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 RNY1P7-201ENST00000384743 110 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AL161788.1-201ENST00000441805 169 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC093259.1-201ENST00000509755 300 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC026436.1-201ENST00000510537 270 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 SNORA18.4-201ENST00000516440 124 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-365P-201ENST00000517113 106 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AL365205.2-201ENST00000594586 68 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 JPX_2.1-201ENST00000614161 69 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 AC009831.4-201ENST00000620744 325 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 MIR1248-201ENST00000629190 106 ntBASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 MIR1253-201ENST00000408273 105 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 RNA5SP127-201ENST00000411051 133 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 CKS1BP2-201ENST00000497342 240 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-504P-201ENST00000516568 104 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-856P-201ENST00000516959 98 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 U2.20-201ENST00000613956 192 ntBASIC3.04□□□□□ -1.92
CNTNAP4Q9C0A0 AC103988.1-201ENST00000566382 2177 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.85-201ENST00000363014 111 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.163-201ENST00000363702 113 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 RNU1-96P-201ENST00000364163 162 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.685-201ENST00000516532 108 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 RNU7-149P-201ENST00000516739 59 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 RNU1-104P-201ENST00000517280 175 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 AL356280.1-201ENST00000603614 379 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 AL353997.5-201ENST00000618886 171 ntBASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CNTNAP4Q9C0A0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 AC018634.1-201ENST00000437554 401 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 RN7SKP12-201ENST00000516275 143 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 MIR3117-201ENST00000584034 78 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 AC025521.1-201ENST00000621624 286 ntBASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 SNORA68.1-201ENST00000364537 132 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 SNORA51.5-201ENST00000384126 131 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 MIR891A-201ENST00000401237 79 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 RNU7-99P-201ENST00000516271 62 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-65P-201ENST00000516332 98 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 SNORA48.11-201ENST00000517015 89 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 AL358944.1-201ENST00000528537 144 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 MIR5007-201ENST00000583098 95 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms