Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 AC093027.1-201ENST00000546698 429 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 MIR6504-201ENST00000613520 61 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.58-201ENST00000362807 102 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 SNORD81.1-201ENST00000363064 77 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.154-201ENST00000363624 102 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.269-201ENST00000364685 89 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.310-201ENST00000365063 113 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RNY3P1-201ENST00000365085 102 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RNY3-201ENST00000365484 102 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.368-201ENST00000365547 113 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 MIR15B-201ENST00000385045 98 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 AL590004.1-201ENST00000405321 300 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 MTND1P14-201ENST00000427400 950 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 HMGN2P32-201ENST00000444648 269 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 MTND5P20-201ENST00000448677 143 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-976P-201ENST00000516086 111 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 SNORA40.14-201ENST00000516543 86 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 RNA5SP102-201ENST00000516865 106 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
NDUFAF3Q9BU61 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.5-201ENST00000362334 102 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.80-201ENST00000362996 102 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.439-201ENST00000384119 94 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.485-201ENST00000384395 102 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 MIR1276-201ENST00000408707 83 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 COX6CP14-201ENST00000469580 174 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 MIR548S-201ENST00000581352 82 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 AC112487.2-201ENST00000637950 304 ntBASIC0.84□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.203-201ENST00000364106 102 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.330-201ENST00000365230 109 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 RNU6-53P-201ENST00000365367 106 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.526-201ENST00000384572 110 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 RNU4-30P-201ENST00000410245 143 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 AF228730.4-201ENST00000421457 183 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 U8.20-201ENST00000459445 131 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 AC117454.1-201ENST00000491120 168 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 RPL23AP54-201ENST00000495129 419 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 RNU7-41P-201ENST00000515917 61 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.702-201ENST00000516843 96 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 AC024405.2-202ENST00000532731 184 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 MIR4764-201ENST00000580680 88 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 AL078603.1-201ENST00000603824 313 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 AP003357.1-201ENST00000604497 148 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 SNORD58B-201ENST00000607313 66 ntBASIC0.83□□□□□ -2.28
NDUFAF3Q9BU61 MIR103A2-201ENST00000362154 78 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 SNORA25.3-201ENST00000363205 127 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.122-201ENST00000363331 96 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.143-201ENST00000363520 106 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 SNORD14E-201ENST00000364009 85 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 U8.7-201ENST00000364940 136 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 SNORD63-201ENST00000384262 68 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 RNU6-937P-201ENST00000384325 106 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.551-201ENST00000384661 102 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 RNU6-21P-201ENST00000384710 107 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 MIR518E-201ENST00000385252 88 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 RNU7-43P-201ENST00000516554 64 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.713-201ENST00000517013 96 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 MIR3145-201ENST00000580727 82 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 MIR4801-201ENST00000582704 82 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 AC006157.1-201ENST00000611750 366 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 JPX_2.1-201ENST00000614161 69 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 AC007742.2-201ENST00000618226 398 ntBASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.116-201ENST00000363292 103 ntBASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.579-201ENST00000390939 94 ntBASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 SNORD123-201ENST00000459473 70 ntBASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 AC093852.1-201ENST00000503587 266 ntBASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.315-201ENST00000365117 102 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.471-201ENST00000384312 102 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 RNY1P14-201ENST00000384426 108 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 HMGN1P10-201ENST00000474557 553 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 RNU7-115P-201ENST00000516433 55 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 AC127455.1-201ENST00000565496 145 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 MIR548AY-201ENST00000617669 107 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 SEPT14P17-201ENST00000617978 177 ntBASIC0.8□□□□□ -2.28
NDUFAF3Q9BU61 RNA5SP48-201ENST00000363969 126 ntBASIC0.79□□□□□ -2.28
NDUFAF3Q9BU61 Y_RNA.197-201ENST00000364004 102 ntBASIC0.79□□□□□ -2.28
NDUFAF3Q9BU61 RNU4-50P-201ENST00000364361 141 ntBASIC0.79□□□□□ -2.28
NDUFAF3Q9BU61 SNORD38C-201ENST00000384381 69 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms