Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 RNU6-484P-201ENST00000384016 107 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 SRIP3-201ENST00000413200 219 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AC060773.1-201ENST00000421698 310 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AL353689.1-201ENST00000438895 199 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AL121914.1-201ENST00000450188 156 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 RNU7-128P-201ENST00000517247 62 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 MIR548AI-201ENST00000579940 88 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 AL353149.1-201ENST00000610667 244 ntBASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SH2D3AQ9BRG2 RNU4-11P-201ENST00000365287 132 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 RNU6-597P-201ENST00000365620 102 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 RNU6-1168P-201ENST00000390831 104 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 U8.13-201ENST00000390842 128 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 SNORA40.18-201ENST00000391200 128 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 Y_RNA.622-201ENST00000411091 108 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC006461.1-201ENST00000412637 326 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC009238.1-201ENST00000442165 424 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 RPS4XP11-201ENST00000446897 772 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC009237.6-201ENST00000446969 424 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 RPL23AP54-201ENST00000495129 419 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 SNORA4.4-201ENST00000515921 135 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 SNORA25.12-201ENST00000516202 82 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 AC097639.2-201ENST00000603159 172 ntBASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SH2D3AQ9BRG2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SH2D3AQ9BRG2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 SNORD45.3-201ENST00000363836 72 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.251-201ENST00000364551 99 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-768P-201ENST00000384683 107 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 MIR1262-201ENST00000408276 93 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RNU2-51P-201ENST00000410708 197 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RPL30P13-201ENST00000418873 348 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 MTND4LP9-201ENST00000427694 174 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 snoU13.23-201ENST00000458863 104 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 RPS27P22-201ENST00000478056 241 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 MIR4438-201ENST00000585271 93 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 AL929325.1-201ENST00000603096 117 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 MIR6845-201ENST00000613182 61 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SH2D3AQ9BRG2 SNORA33-201ENST00000363664 130 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 SNORA40-201ENST00000388090 126 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AL512604.1-201ENST00000404812 257 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 SNORD11-201ENST00000459124 84 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AC092991.1-201ENST00000477176 376 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 SNORD77.4-201ENST00000516158 81 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 RNU7-172P-201ENST00000517125 64 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AC091178.2-201ENST00000584401 117 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 AP001340.1-201ENST00000624405 217 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 U6.108-201ENST00000637764 58 ntBASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.796-201ENST00000364268 102 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-978P-201ENST00000364371 103 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 SNORD114-6-201ENST00000364393 72 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 Y_RNA.799-201ENST00000364992 102 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 MIR562-201ENST00000384894 95 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 AL117342.1-201ENST00000404861 406 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 RNA5SP153-201ENST00000516498 76 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-197P-201ENST00000516680 100 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 AC112693.2-201ENST00000556538 232 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 AC091895.1-201ENST00000624494 256 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
SH2D3AQ9BRG2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 RPS27P1-201ENST00000450552 247 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 AC011406.1-201ENST00000512440 370 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 RNU7-99P-201ENST00000516271 62 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 RNU6-62P-201ENST00000516526 102 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 MIR378D2-201ENST00000580636 98 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 MIR2681-201ENST00000581814 105 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 AL365222.1-201ENST00000614661 98 ntBASIC2.12□□□□□ -2.07
SH2D3AQ9BRG2 MIR338-201ENST00000636369 67 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms