Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORD116-13-201ENST00000384408 92 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 Y_RNA.509-201ENST00000384506 99 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 RNU6-376P-201ENST00000384731 106 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 SNORD41-201ENST00000386967 70 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
FOXC2Q99958 AC236972.2-201ENST00000434979 310 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.8□□□□□ -2.28
FOXC2Q99958 RNU6-917P-201ENST00000516294 104 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 RNU6-1291P-201ENST00000516591 104 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 RNU6-1096P-201ENST00000517089 102 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
FOXC2Q99958 AP001094.1-201ENST00000579805 193 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 MIR4762-201ENST00000585261 75 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AL133255.1-201ENST00000606374 441 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
FOXC2Q99958 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
FOXC2Q99958 U8.5-201ENST00000364528 136 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 SNORD63-201ENST00000384262 68 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 Y_RNA.579-201ENST00000390939 94 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 Y_RNA.639-201ENST00000458981 102 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 SNORA70.12-201ENST00000516084 153 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 RNU6-922P-201ENST00000516753 99 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 C8orf59P2-201ENST00000603441 271 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AL080274.1-201ENST00000605565 220 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AL121655.1-201ENST00000605811 308 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AC004832.4-201ENST00000608952 331 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 uc_338.22-201ENST00000622722 187 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
FOXC2Q99958 RNU6-199P-201ENST00000362954 107 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 Y_RNA.80-201ENST00000362996 102 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 SNORD114-23-201ENST00000363536 72 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 Y_RNA.265-201ENST00000364677 108 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 Y_RNA.433-201ENST00000384089 102 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 Y_RNA.485-201ENST00000384395 102 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RNU6-136P-201ENST00000384663 107 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 MT-TD-201ENST00000387419 68 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 MCFD2P1-201ENST00000417812 300 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RPEP5-201ENST00000441137 268 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 AC010655.3-201ENST00000478818 450 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RNU6-475P-201ENST00000516073 104 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 RN7SKP295-201ENST00000517264 153 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 AC006380.1-201ENST00000603598 186 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 AC103810.9-201ENST00000606688 112 ntBASIC0.78□□□□□ -2.28
FOXC2Q99958 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.78□□□□□ -2.28
FOXC2Q99958 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
FOXC2Q99958 Y_RNA.85-201ENST00000363014 111 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 RNU6-833P-201ENST00000363486 107 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 RNU6-1175P-201ENST00000365200 107 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 Y_RNA.329-201ENST00000365209 107 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 SNORA2.2-201ENST00000365473 135 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 MIR628-201ENST00000385229 95 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 MIR1302-11-201ENST00000408051 138 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 MIR1302-9-201ENST00000408365 138 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 MIR1302-10-201ENST00000408734 138 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.77□□□□□ -2.29
FOXC2Q99958 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 AC093850.1-201ENST00000454121 251 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 RNU6-155P-201ENST00000516347 100 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
FOXC2Q99958 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.77□□□□□ -2.29
FOXC2Q99958 MIR1302-2-201ENST00000607096 138 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 AC027279.3-201ENST00000625055 122 ntBASIC0.77□□□□□ -2.29
FOXC2Q99958 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
FOXC2Q99958 Y_RNA.39-201ENST00000362620 98 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 Y_RNA.310-201ENST00000365063 113 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 MIR526A1-201ENST00000384897 85 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 RNU6-130P-201ENST00000411112 103 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 AL160004.2-201ENST00000432935 350 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 RPS20P10-201ENST00000451209 253 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 Y_RNA.661-201ENST00000516003 99 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 RNU6-1116P-201ENST00000517269 99 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 AC005972.2-201ENST00000604690 348 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 PART1_1.1-201ENST00000611761 217 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 Y_RNA.804-201ENST00000615262 101 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 AL138825.1-201ENST00000618587 192 ntBASIC0.76□□□□□ -2.29
FOXC2Q99958 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
FOXC2Q99958 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
FOXC2Q99958 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
FOXC2Q99958 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
FOXC2Q99958 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
FOXC2Q99958 Y_RNA.368-201ENST00000365547 113 ntBASIC0.75□□□□□ -2.29
FOXC2Q99958 RNU6-1323P-201ENST00000384025 107 ntBASIC0.75□□□□□ -2.29
FOXC2Q99958 Y_RNA.551-201ENST00000384661 102 ntBASIC0.75□□□□□ -2.29
FOXC2Q99958 MIR936-201ENST00000401264 98 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms