Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 RNU6-111P-201ENST00000517179 105 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 RPL23AP91-201ENST00000569211 455 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.771-201ENST00000598668 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 AL442067.1-201ENST00000613261 223 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.789-201ENST00000622480 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NPAS1Q99742 RNU4-10P-201ENST00000364383 140 ntBASIC1.78□□□□□ -2.12
NPAS1Q99742 RNU6-163P-201ENST00000384396 106 ntBASIC1.78□□□□□ -2.12
NPAS1Q99742 RNU6-131P-201ENST00000391144 107 ntBASIC1.78□□□□□ -2.12
NPAS1Q99742 SNORD116-28-201ENST00000516123 91 ntBASIC1.78□□□□□ -2.12
NPAS1Q99742 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
NPAS1Q99742 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS1Q99742 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
NPAS1Q99742 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS1Q99742 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 Y_RNA.24-201ENST00000362508 103 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 Y_RNA.76-201ENST00000362931 109 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 Y_RNA.253-201ENST00000364562 112 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 Y_RNA.515-201ENST00000384535 112 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS1Q99742 Z98949.2-201ENST00000440996 144 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.77□□□□□ -2.13
NPAS1Q99742 RNU7-12P-201ENST00000516030 62 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 RNU6-1007P-201ENST00000516586 107 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
NPAS1Q99742 AC021506.2-201ENST00000612354 169 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 AL365265.1-201ENST00000621045 234 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 SNORD3E-202ENST00000627253 216 ntBASIC1.77□□□□□ -2.13
NPAS1Q99742 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NPAS1Q99742 RNU6-1209P-201ENST00000363655 107 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 Y_RNA.262-201ENST00000364641 102 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 Y_RNA.539-201ENST00000384635 107 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 SNORA12.1-201ENST00000390873 148 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 MIR1289-2-201ENST00000408360 111 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 RNU4-71P-201ENST00000516258 113 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 RNA5SP168-201ENST00000516642 112 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 RNU6-388P-201ENST00000517012 105 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 RNU6-389P-201ENST00000517048 105 ntBASIC1.76□□□□□ -2.13
NPAS1Q99742 RNU6-379P-201ENST00000363813 104 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 RNU6-674P-201ENST00000363831 107 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 RNU6-969P-201ENST00000383900 105 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 Y_RNA.552-201ENST00000384665 112 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 CALM2P4-201ENST00000430810 426 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 SNORD2.1-201ENST00000458762 69 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 OR9P1P-201ENST00000496431 281 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 MIR4298-201ENST00000584380 73 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 AP000648.3-201ENST00000623539 4507 ntBASIC1.75□□□□□ -2.13
NPAS1Q99742 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
NPAS1Q99742 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 MT-TG-201ENST00000387429 68 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 U8.16-201ENST00000391279 133 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 RPL30P13-201ENST00000418873 348 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 PIGPP3-201ENST00000425307 415 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 PGBD4P5-201ENST00000445958 426 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 snoU13.15-201ENST00000459407 104 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.74□□□□□ -2.13
NPAS1Q99742 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 MIR4282-201ENST00000583613 67 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 MIR8063-201ENST00000621930 81 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.74□□□□□ -2.13
NPAS1Q99742 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
NPAS1Q99742 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NPAS1Q99742 Y_RNA.199-201ENST00000364014 102 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 Y_RNA.304-201ENST00000365011 112 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 Y_RNA.308-201ENST00000365043 101 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 RNA5SP259-201ENST00000365541 109 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.73□□□□□ -2.13
NPAS1Q99742 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 RNU6-1116P-201ENST00000517269 99 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 SUMO2P16-201ENST00000519475 264 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.73□□□□□ -2.13
NPAS1Q99742 MIR4778-201ENST00000577635 80 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 AC078938.1-201ENST00000620993 318 ntBASIC1.73□□□□□ -2.13
NPAS1Q99742 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NPAS1Q99742 Y_RNA.796-201ENST00000364268 102 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 Y_RNA.799-201ENST00000364992 102 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 snoU2-30.1-201ENST00000365012 70 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 MIR522-201ENST00000385071 87 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 RNA5SP496-201ENST00000391240 109 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 AC004965.1-201ENST00000413033 213 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 RNY3P16-201ENST00000516338 101 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.72□□□□□ -2.13
NPAS1Q99742 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.72□□□□□ -2.13
NPAS1Q99742 AL049861.1-201ENST00000603130 150 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 AC120024.3-201ENST00000603167 156 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 AL513423.1-201ENST00000621695 132 ntBASIC1.72□□□□□ -2.13
NPAS1Q99742 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms