Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR5094-201ENST00000578766 85 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 MIR2681-201ENST00000581814 105 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 AL021707.8-201ENST00000609428 183 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 AC012640.5-201ENST00000623897 319 ntBASIC2.06□□□□□ -2.08
SNX18Q96RF0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.06□□□□□ -2.08
SNX18Q96RF0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNX18Q96RF0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNX18Q96RF0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.05□□□□□ -2.08
SNX18Q96RF0 AC005840.1-201ENST00000498412 377 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 JPX_2.1-201ENST00000614161 69 ntBASIC2.05□□□□□ -2.08
SNX18Q96RF0 RNU6-449P-201ENST00000383914 107 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 RNY3P5-201ENST00000384127 102 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 RNU6-239P-201ENST00000390990 99 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX18Q96RF0 RNU7-94P-201ENST00000459576 63 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 AC107027.2-201ENST00000512197 115 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
SNX18Q96RF0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNX18Q96RF0 SNORA1B-201ENST00000362535 133 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 SNORD45.3-201ENST00000363836 72 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SNX18Q96RF0 Y_RNA.580-201ENST00000391004 95 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 AL606517.2-201ENST00000442855 241 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 SNRPGP8-201ENST00000454064 226 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 SNORD11-201ENST00000459124 84 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 RNU1-41P-201ENST00000516161 162 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 RNU1-48P-201ENST00000516400 162 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 uc_338.4-201ENST00000616635 176 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
SNX18Q96RF0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNU6-818P-201ENST00000364837 108 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNU6-643P-201ENST00000384018 107 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 MIR562-201ENST00000384894 95 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNA5SP109-201ENST00000391010 116 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNA5SP425-201ENST00000410336 112 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SNX18Q96RF0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
SNX18Q96RF0 AC023449.1-201ENST00000454464 154 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 UBL5P3-201ENST00000475112 231 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 HMGN1P7-201ENST00000491722 313 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 AC022217.4-201ENST00000604389 163 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 AC046143.2-201ENST00000609789 160 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 MTND1P7-201ENST00000632801 297 ntBASIC2.02□□□□□ -2.09
SNX18Q96RF0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNX18Q96RF0 RNU6-151P-201ENST00000364158 107 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 RNY1P5-201ENST00000383890 115 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SNX18Q96RF0 SNORA12.1-201ENST00000390873 148 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 RNA5SP501-201ENST00000410990 112 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 AC245047.3-201ENST00000429428 127 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 SNRPGP10-201ENST00000432323 225 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 AL049830.1-201ENST00000468034 425 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 RNU2-56P-201ENST00000516826 190 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 AP002004.2-201ENST00000531656 154 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.01□□□□□ -2.09
SNX18Q96RF0 MIR3658-201ENST00000636291 56 ntBASIC2.01□□□□□ -2.09
SNX18Q96RF0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SNX18Q96RF0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNX18Q96RF0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SNX18Q96RF0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNX18Q96RF0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
SNX18Q96RF0 MIR126-201ENST00000362291 85 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RN7SKP192-201ENST00000411291 327 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RPS27P1-201ENST00000450552 247 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 SNORD116-25-201ENST00000516517 92 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNU7-121P-201ENST00000516604 62 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 AL358944.1-201ENST00000528537 144 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2□□□□□ -2.09
SNX18Q96RF0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 AL591926.4-201ENST00000616895 298 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 Y_RNA.778-201ENST00000620203 90 ntBASIC2□□□□□ -2.09
SNX18Q96RF0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 Y_RNA.432-201ENST00000384087 111 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 SNORA79-201ENST00000408376 140 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 RNU4-43P-201ENST00000410628 137 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms