Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF558Q96NG5 AC090971.5-201ENST00000621102 293 ntBASIC1.22□□□□□ -2.21
ZNF558Q96NG5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
ZNF558Q96NG5 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
ZNF558Q96NG5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.21□□□□□ -2.22
ZNF558Q96NG5 HMGN1P10-201ENST00000474557 553 ntBASIC1.21□□□□□ -2.22
ZNF558Q96NG5 AC114811.1-201ENST00000507207 168 ntBASIC1.21□□□□□ -2.22
ZNF558Q96NG5 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
ZNF558Q96NG5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF558Q96NG5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF558Q96NG5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF558Q96NG5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.143-201ENST00000363520 106 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 RNU5E-4P-201ENST00000364931 120 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 SNORA63.7-201ENST00000365579 123 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 RNU6-21P-201ENST00000384710 107 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 MIR452-201ENST00000385020 85 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 PMCHL1-202ENST00000423102 261 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 PIGPP3-201ENST00000425307 415 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 AL160413.1-201ENST00000622780 310 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
ZNF558Q96NG5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
ZNF558Q96NG5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.31-201ENST00000362574 102 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 RNY1-201ENST00000364228 113 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 RNU6-867P-201ENST00000364956 107 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.424-201ENST00000384063 103 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.445-201ENST00000384168 102 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 AL590004.1-201ENST00000405321 300 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 RNU4-30P-201ENST00000410245 143 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 AC010655.3-201ENST00000478818 450 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 AP003357.1-201ENST00000604497 148 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 SNORD113-5-201ENST00000607261 78 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF558Q96NG5 AC022709.1-201ENST00000615967 87 ntBASIC1.19□□□□□ -2.22
ZNF558Q96NG5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 AC117470.1-201ENST00000381974 330 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.460-201ENST00000384255 102 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.645-201ENST00000391229 102 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 SEPT14P8-201ENST00000508026 178 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 RNU6-113P-201ENST00000516653 101 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.18□□□□□ -2.22
ZNF558Q96NG5 AC136932.1-201ENST00000574771 208 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 POLR3GP1-201ENST00000594073 261 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.28-201ENST00000362554 111 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.148-201ENST00000363557 117 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 SNORA70.7-201ENST00000384159 133 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 RNU6-308P-201ENST00000390957 107 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 MIR1298-201ENST00000408783 112 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 RPL39P39-201ENST00000455840 151 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 BX284668.6-201ENST00000606899 438 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ZNF558Q96NG5 AC090574.1-201ENST00000623186 233 ntBASIC1.17□□□□□ -2.22
ZNF558Q96NG5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF558Q96NG5 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.222-201ENST00000364264 102 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.383-201ENST00000383855 97 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 LINC01399-202ENST00000458450 244 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.16□□□□□ -2.22
ZNF558Q96NG5 RNU7-115P-201ENST00000516433 55 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 SNORD45.4-201ENST00000516629 73 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.715-201ENST00000517082 110 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 RNU6-1223P-201ENST00000517124 104 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AC024405.2-202ENST00000532731 184 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AC127455.1-201ENST00000565496 145 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 MIR3145-201ENST00000580727 82 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AC124312.5-201ENST00000604451 268 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 MTND4P29-201ENST00000503122 1372 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 AL442644.1-201ENST00000454390 3105 ntBASIC1.16□□□□□ -2.22
ZNF558Q96NG5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF558Q96NG5 Y_RNA.61-201ENST00000362835 102 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 Y_RNA.183-201ENST00000363882 113 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 Y_RNA.813-201ENST00000364639 102 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 Y_RNA.286-201ENST00000364813 102 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 RNU6-474P-201ENST00000384243 107 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 Y_RNA.535-201ENST00000384612 99 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 RNU6-823P-201ENST00000391042 103 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.15□□□□□ -2.23
ZNF558Q96NG5 RNU6-131P-201ENST00000391144 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms