Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.24-201ENST00000362508 103 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-674P-201ENST00000363831 107 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 MIR1278-201ENST00000408753 81 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 RPL31P63-201ENST00000422565 375 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 RNU7-34P-201ENST00000459394 64 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 COX6CP14-201ENST00000469580 174 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 RNY3P16-201ENST00000516338 101 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 AC100767.1-201ENST00000528178 123 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 AC130289.1-201ENST00000577321 73 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 AC012493.3-201ENST00000604494 112 ntBASIC2.11□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.83-201ENST00000363005 113 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-653P-201ENST00000363074 106 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 RNU4-41P-201ENST00000364426 143 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.308-201ENST00000365043 101 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 MIR526A2-201ENST00000390198 65 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 RNU1-41P-201ENST00000516161 162 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 RNU1-48P-201ENST00000516400 162 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 AL591926.4-201ENST00000616895 298 ntBASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDK5RAP3Q96JB5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-969P-201ENST00000383900 105 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.572-201ENST00000384757 98 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 MIR626-201ENST00000385032 94 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 HMGN1P7-201ENST00000491722 313 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 RNU7-28P-201ENST00000516759 62 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 MIR2681-201ENST00000581814 105 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 JPX_2.1-201ENST00000614161 69 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.09□□□□□ -2.07
CDK5RAP3Q96JB5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 MIR126-201ENST00000362291 85 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 RNA5SP482-201ENST00000391269 118 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-493P-201ENST00000391321 108 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 AL034345.1-201ENST00000407768 123 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 RPL23AP91-201ENST00000569211 455 ntBASIC2.08□□□□□ -2.08
CDK5RAP3Q96JB5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 MIR411-201ENST00000362239 96 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-1209P-201ENST00000363655 107 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 Y_RNA.274-201ENST00000364714 101 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-439P-201ENST00000384188 106 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-360P-201ENST00000390944 104 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 SNRPGP10-201ENST00000432323 225 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 Z98949.2-201ENST00000440996 144 ntBASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK5RAP3Q96JB5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 Y_RNA.796-201ENST00000364268 102 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-200P-201ENST00000364743 107 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 Y_RNA.297-201ENST00000364950 91 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 Y_RNA.799-201ENST00000364992 102 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNU4-17P-201ENST00000365598 141 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 SNORA12.1-201ENST00000390873 148 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 AC108059.2-201ENST00000434626 151 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 OR9P1P-201ENST00000496431 281 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-138P-201ENST00000515952 107 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-794P-201ENST00000517261 64 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 MIR5688-201ENST00000580619 83 ntBASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-661P-201ENST00000362409 107 ntBASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDK5RAP3Q96JB5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 snoU2_19.4-201ENST00000364329 80 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 Y_RNA.229-201ENST00000364347 113 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 RNU6-131P-201ENST00000391144 107 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 RNA5SP496-201ENST00000391240 109 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AC245047.8-201ENST00000456455 284 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 UBL5P3-201ENST00000475112 231 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
CDK5RAP3Q96JB5 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 883.7 ms