Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC007012.1-201ENST00000567192 175 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 MIR4765-201ENST00000585007 77 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
CHFRQ96EP1 SNORD12C-201ENST00000386307 89 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 MIR147B-201ENST00000390185 80 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 CALM2P4-201ENST00000430810 426 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.55□□□□□ -2
CHFRQ96EP1 AL021397.1-201ENST00000451806 248 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 SNORD65B-201ENST00000459126 73 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.55□□□□□ -2
CHFRQ96EP1 AL929325.1-201ENST00000603096 117 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 MIR1245B-201ENST00000636115 69 ntBASIC2.55□□□□□ -2
CHFRQ96EP1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHFRQ96EP1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHFRQ96EP1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 RNA5SP125-201ENST00000364843 120 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 SNORA51.5-201ENST00000384126 131 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 Y_RNA.528-201ENST00000384575 108 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 RNA5SP511-201ENST00000410487 115 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 RNU2-70P-201ENST00000410718 179 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.54□□□□□ -2
CHFRQ96EP1 snoU13.26-201ENST00000459452 105 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 RNA5SP236-201ENST00000516169 116 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 uc_338.4-201ENST00000616635 176 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.54□□□□□ -2
CHFRQ96EP1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 RNU6-117P-201ENST00000365415 107 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 RNU6-573P-201ENST00000383938 106 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 SNORD14D-201ENST00000384390 87 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 MIR624-201ENST00000385217 97 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHFRQ96EP1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 SNORD11-201ENST00000459124 84 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC010531.2-201ENST00000465012 153 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC234781.5-201ENST00000508429 271 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC007751.1-201ENST00000529260 376 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC015720.1-201ENST00000565251 277 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHFRQ96EP1 AL035470.1-201ENST00000622571 220 ntBASIC2.53□□□□□ -2
CHFRQ96EP1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHFRQ96EP1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2.01
CHFRQ96EP1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHFRQ96EP1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHFRQ96EP1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNY1P7-201ENST00000384743 110 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNU6-440P-201ENST00000390882 105 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNU6-592P-201ENST00000411333 103 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 MICF-203ENST00000432679 129 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.52□□□□□ -2.01
CHFRQ96EP1 AC245102.2-201ENST00000448956 180 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AC010598.1-201ENST00000510378 103 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNU6-365P-201ENST00000517113 106 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AC027419.1-201ENST00000522976 328 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 RPL23AP91-201ENST00000569211 455 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AC105245.1-201ENST00000581934 244 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AL365205.2-201ENST00000594586 68 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.52□□□□□ -2.01
CHFRQ96EP1 uc_338.14-201ENST00000613162 166 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 MIR7843-201ENST00000622274 79 ntBASIC2.52□□□□□ -2.01
CHFRQ96EP1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHFRQ96EP1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHFRQ96EP1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHFRQ96EP1 RNU6-655P-201ENST00000362858 107 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNU6-1014P-201ENST00000383940 103 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 MIR570-201ENST00000384917 97 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNA5SP127-201ENST00000411051 133 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 AF228730.3-201ENST00000436691 102 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNU7-57P-201ENST00000459540 60 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 ATP5EP1-201ENST00000510257 156 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNA5SP112-201ENST00000515937 99 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNA5SP20-201ENST00000515976 84 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 SNORA40.13-201ENST00000516379 120 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 SNORA18.4-201ENST00000516440 124 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 RNU6-94P-201ENST00000607728 107 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.51□□□□□ -2.01
CHFRQ96EP1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.51□□□□□ -2.01
CHFRQ96EP1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHFRQ96EP1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.5□□□□□ -2.01
CHFRQ96EP1 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNU6-271P-201ENST00000363858 105 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms