Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 Y_RNA.37-201ENST00000362606 108 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 SNORD68-201ENST00000363214 84 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 SNORD14E-201ENST00000364009 85 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 ICE2P2-201ENST00000483823 2787 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 RNU6-1041P-201ENST00000516254 102 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 RNU1-142P-201ENST00000516682 145 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 SCARNA3-201ENST00000517097 143 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 DEFB131E-201ENST00000532329 154 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 AC079600.2-201ENST00000550076 130 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 AL033523.1-201ENST00000605153 153 ntBASIC3.23□□□□□ -1.89
TNFRSF25Q93038 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TNFRSF25Q93038 AC092435.3-201ENST00000565538 3654 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TNFRSF25Q93038 MIR340-201ENST00000362125 95 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6-1084P-201ENST00000362498 107 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNY3P2-201ENST00000362918 102 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6-816P-201ENST00000390914 107 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNA5SP323-201ENST00000391094 133 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6-1268P-201ENST00000391214 107 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6-1239P-201ENST00000391310 107 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU1-131P-201ENST00000458943 161 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 AC091826.1-201ENST00000514065 313 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 SNORD36C-201ENST00000516733 66 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 RNU6-711P-201ENST00000517255 106 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF25Q93038 MIR4305-201ENST00000583252 102 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 AC006441.5-201ENST00000612680 209 ntBASIC3.22□□□□□ -1.89
TNFRSF25Q93038 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF25Q93038 SNORA1B-201ENST00000362535 133 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 RNY1P10-201ENST00000363268 113 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 RNU1-23P-201ENST00000363361 144 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 MIR1912-201ENST00000410389 80 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 RNU6-1328P-201ENST00000410938 106 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 AL445646.1-201ENST00000431784 216 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 AC009238.1-201ENST00000442165 424 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 AC009237.6-201ENST00000446969 424 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 RNU6-893P-201ENST00000458841 100 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 SCARNA23-201ENST00000516060 130 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 SNORA74D-201ENST00000516404 141 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 SNORA18.7-201ENST00000516910 131 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 AP002004.2-201ENST00000531656 154 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF25Q93038 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 MIR7157-201ENST00000635801 60 ntBASIC3.21□□□□□ -1.9
TNFRSF25Q93038 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TNFRSF25Q93038 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF25Q93038 Y_RNA.351-201ENST00000365436 96 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 Y_RNA.547-201ENST00000384654 119 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFRSF25Q93038 CYP2C59P-201ENST00000457790 269 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 RNU7-6P-201ENST00000516845 62 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TNFRSF25Q93038 MIR4778-201ENST00000577635 80 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 AC005000.2-201ENST00000605468 310 ntBASIC3.2□□□□□ -1.9
TNFRSF25Q93038 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF25Q93038 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF25Q93038 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF25Q93038 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF25Q93038 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
TNFRSF25Q93038 SNORA11.1-201ENST00000408133 129 ntBASIC3.19□□□□□ -1.9
TNFRSF25Q93038 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFRSF25Q93038 MIR338-201ENST00000636369 67 ntBASIC3.19□□□□□ -1.9
TNFRSF25Q93038 MIR7515-201ENST00000637837 67 ntBASIC3.19□□□□□ -1.9
TNFRSF25Q93038 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF25Q93038 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF25Q93038 RNU6-268P-201ENST00000364174 107 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 snoU2-30.1-201ENST00000365012 70 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 Y_RNA.440-201ENST00000384120 114 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 Y_RNA.593-201ENST00000410292 98 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF25Q93038 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 MICF-203ENST00000432679 129 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 AC099677.2-201ENST00000436385 175 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF25Q93038 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.18□□□□□ -1.9
TNFRSF25Q93038 U6.108-201ENST00000637764 58 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
TNFRSF25Q93038 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFRSF25Q93038 Y_RNA.17-201ENST00000362433 111 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 RNU1-112P-201ENST00000364401 164 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 RNU4-16P-201ENST00000364737 141 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 SNORA8-201ENST00000384574 139 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 SNX2P2-201ENST00000424553 323 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 RNU7-80P-201ENST00000459562 61 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 RNU7-94P-201ENST00000459576 63 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 RNU2-35P-201ENST00000516446 142 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 AP003484.1-201ENST00000530974 250 ntBASIC3.17□□□□□ -1.9
TNFRSF25Q93038 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF25Q93038 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF25Q93038 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms