Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.73□□□□□ -1.97
BRF1Q92994 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
BRF1Q92994 RNU6-862P-201ENST00000362804 105 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 Y_RNA.66-201ENST00000362862 102 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 Y_RNA.242-201ENST00000364473 110 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 Y_RNA.267-201ENST00000364679 109 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 RNU6-915P-201ENST00000364943 103 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
BRF1Q92994 AL163195.1-201ENST00000496941 348 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.72□□□□□ -1.97
BRF1Q92994 RNU4-57P-201ENST00000515980 135 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 RNU6-1333P-201ENST00000516162 93 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 RNU6-365P-201ENST00000517113 106 ntBASIC2.72□□□□□ -1.97
BRF1Q92994 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
BRF1Q92994 SNORD56.5-201ENST00000364281 72 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 Y_RNA.261-201ENST00000364631 102 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 RNU6-1336P-201ENST00000383886 109 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 RNU1-148P-201ENST00000384472 162 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 SNORA67.4-201ENST00000384688 142 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AC099677.2-201ENST00000436385 175 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 MRPS17P9-201ENST00000511924 393 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 RNA5SP137-201ENST00000516833 135 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 RNU6-1234P-201ENST00000516877 103 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.71□□□□□ -1.98
BRF1Q92994 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.71□□□□□ -1.98
BRF1Q92994 MIR5007-201ENST00000583098 95 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AC131055.1-201ENST00000584626 316 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AC008507.4-201ENST00000585464 127 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AL365205.2-201ENST00000594586 68 ntBASIC2.71□□□□□ -1.98
BRF1Q92994 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.71□□□□□ -1.98
BRF1Q92994 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
BRF1Q92994 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRF1Q92994 SNORA1B-201ENST00000362535 133 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 RNU6-23P-201ENST00000363283 107 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 Y_RNA.120-201ENST00000363304 110 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 CYCSP49-201ENST00000420810 319 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 FTH1P12-201ENST00000432137 551 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.7□□□□□ -1.98
BRF1Q92994 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.7□□□□□ -1.98
BRF1Q92994 RNU7-26P-201ENST00000458980 63 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 AL049830.1-201ENST00000468034 425 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 RNU6-504P-201ENST00000516568 104 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 Y_RNA.714-201ENST00000517065 90 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 AC005786.1-201ENST00000588553 154 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 AL591926.4-201ENST00000616895 298 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 MIR6766-201ENST00000622641 72 ntBASIC2.7□□□□□ -1.98
BRF1Q92994 RNU1-58P-201ENST00000362413 163 ntBASIC2.69□□□□□ -1.98
BRF1Q92994 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.69□□□□□ -1.98
BRF1Q92994 RNA5SP24-201ENST00000516478 95 ntBASIC2.69□□□□□ -1.98
BRF1Q92994 AC022513.1-201ENST00000624512 117 ntBASIC2.69□□□□□ -1.98
BRF1Q92994 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
BRF1Q92994 MIR126-201ENST00000362291 85 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 Y_RNA.273-201ENST00000364703 102 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 SNORD24-201ENST00000383884 75 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 MIR522-201ENST00000385071 87 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 MIR624-201ENST00000385217 97 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 SNORA12.1-201ENST00000390873 148 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 SNORA11.4-201ENST00000408823 129 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 RNU6-659P-201ENST00000516454 104 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 AC007751.1-201ENST00000529260 376 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 AC091544.4-201ENST00000555268 342 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 MIR3126-201ENST00000577443 74 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 MIR4762-201ENST00000585261 75 ntBASIC2.68□□□□□ -1.98
BRF1Q92994 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRF1Q92994 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 Y_RNA.563-201ENST00000384707 108 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 SNORD72-201ENST00000390994 80 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 RNA5SP127-201ENST00000411051 133 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.67□□□□□ -1.98
BRF1Q92994 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.67□□□□□ -1.98
BRF1Q92994 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.67□□□□□ -1.98
BRF1Q92994 RNA5SP281-201ENST00000516504 135 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 Y_RNA.757-201ENST00000578934 114 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 AL359881.1-201ENST00000602916 267 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 SCARNA15.3-201ENST00000626315 122 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 SCARNA4.1-201ENST00000628597 123 ntBASIC2.67□□□□□ -1.98
BRF1Q92994 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.67□□□□□ -1.98
BRF1Q92994 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
BRF1Q92994 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRF1Q92994 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
BRF1Q92994 U8.1-201ENST00000362843 134 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 U8.5-201ENST00000364528 136 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 Y_RNA.280-201ENST00000364765 112 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.66□□□□□ -1.98
BRF1Q92994 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.66□□□□□ -1.98
BRF1Q92994 RN7SKP179-201ENST00000516126 217 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 Y_RNA.692-201ENST00000516627 105 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 AC022217.4-201ENST00000604389 163 ntBASIC2.66□□□□□ -1.98
BRF1Q92994 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
BRF1Q92994 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
BRF1Q92994 RNU6-834P-201ENST00000362367 110 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 RNU6-888P-201ENST00000363010 101 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 RNU6-1292P-201ENST00000383856 107 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 AL603914.1-201ENST00000401964 204 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 TRBV12-1-201ENST00000479785 344 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms