Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ICE2P2-201ENST00000483823 2787 ntBASIC3.4□□□□□ -1.86
HPS1Q92902 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HPS1Q92902 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
HPS1Q92902 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HPS1Q92902 RNU6-1094P-201ENST00000362416 104 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 SNORA25.6-201ENST00000364121 118 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HPS1Q92902 RNU6-129P-201ENST00000391022 107 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 RPS29P7-201ENST00000439662 171 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 AC125388.1-201ENST00000459631 156 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 AL163195.1-201ENST00000496941 348 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 AC114811.1-201ENST00000507207 168 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 SCARNA17.1-201ENST00000516211 143 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 SCARNA17.2-201ENST00000516334 143 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPS1Q92902 AC103810.6-201ENST00000606708 136 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 SCARNA17.4-201ENST00000614296 143 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HPS1Q92902 AC005336.3-201ENST00000623833 2679 ntBASIC3.4□□□□□ -1.87
HPS1Q92902 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPS1Q92902 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.87
HPS1Q92902 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPS1Q92902 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPS1Q92902 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS1Q92902 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS1Q92902 RNA5SP97-201ENST00000365006 84 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 Y_RNA.567-201ENST00000384736 106 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 MIR4444-1-201ENST00000581696 74 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 MIR4444-2-201ENST00000584390 74 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 MIR6868-201ENST00000611215 58 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.39□□□□□ -1.87
HPS1Q92902 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS1Q92902 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
HPS1Q92902 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HPS1Q92902 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS1Q92902 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 RNU6-424P-201ENST00000384367 105 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 RNA5SP261-201ENST00000410536 106 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 SRIP3-201ENST00000413200 219 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS1Q92902 MICF-203ENST00000432679 129 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 RNU7-34P-201ENST00000459394 64 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 SCARNA11.3-201ENST00000517276 130 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.38□□□□□ -1.87
HPS1Q92902 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
HPS1Q92902 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS1Q92902 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS1Q92902 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 MIR449B-201ENST00000384995 97 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 MIR95-201ENST00000385072 81 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 SNORA40.18-201ENST00000391200 128 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 MIR1267-201ENST00000408723 78 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 RNA5SP293-201ENST00000410527 113 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 RNU2-48P-201ENST00000410694 191 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HPS1Q92902 AC096644.4-201ENST00000563417 2912 ntBASIC3.37□□□□□ -1.87
HPS1Q92902 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS1Q92902 RNU6-478P-201ENST00000363904 110 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 SNORA32-201ENST00000384072 121 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 SNORA26.6-201ENST00000391256 115 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 RPS29P28-201ENST00000446439 141 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 RN7SL297P-201ENST00000483161 293 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 RN7SL636P-201ENST00000497504 294 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS1Q92902 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.36□□□□□ -1.87
HPS1Q92902 MIR5739-201ENST00000619803 80 ntBASIC3.36□□□□□ -1.87
HPS1Q92902 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HPS1Q92902 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
HPS1Q92902 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HPS1Q92902 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.35□□□□□ -1.87
HPS1Q92902 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS1Q92902 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS1Q92902 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 Y_RNA.57-201ENST00000362806 113 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 SNORA70.7-201ENST00000384159 133 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 U8.11-201ENST00000384699 133 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 RNA5SP171-201ENST00000391071 115 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 MIR548G-201ENST00000408442 89 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 CST2P1-201ENST00000425770 87 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 U8.18-201ENST00000459285 133 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 RNU7-181P-201ENST00000517234 74 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 DNAJC19P9-201ENST00000555084 351 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 AL513043.2-201ENST00000573941 143 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 Y_RNA.788-201ENST00000622394 112 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.35□□□□□ -1.87
HPS1Q92902 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS1Q92902 AC093908.1-201ENST00000623125 8092 ntBASIC3.35□□□□□ -1.87
HPS1Q92902 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 256.9 ms