Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 Y_RNA.777-201ENST00000516982 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 MIR5692C2-201ENST00000577959 77 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 AC005357.1-201ENST00000588399 301 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.771-201ENST00000598668 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 Y_RNA.789-201ENST00000622480 102 ntBASIC1.84□□□□□ -2.11
HMGB4Q8WW32 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HMGB4Q8WW32 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
HMGB4Q8WW32 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 AC068700.1-201ENST00000565862 3754 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RNU6-414P-201ENST00000363705 104 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RNU4-41P-201ENST00000364426 143 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.416-201ENST00000384014 113 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RNU6-211P-201ENST00000384047 107 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RNU6-651P-201ENST00000411040 105 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 Z98949.2-201ENST00000440996 144 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 SNORD2.1-201ENST00000458762 69 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 MIR4643-201ENST00000577473 78 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
HMGB4Q8WW32 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.277-201ENST00000364754 102 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.307-201ENST00000365022 117 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HMGB4Q8WW32 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 RNU6-437P-201ENST00000459408 95 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 SNORA77B-201ENST00000578179 125 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 MIR4282-201ENST00000583613 67 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 snoU13.31-201ENST00000607291 104 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 AL591926.4-201ENST00000616895 298 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 AC095038.3-201ENST00000634439 195 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGB4Q8WW32 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
HMGB4Q8WW32 AC131280.1-202ENST00000624067 4211 ntBASIC1.82□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.54-201ENST00000362766 105 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.122-201ENST00000363331 96 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 RNU6-1205P-201ENST00000363625 106 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 RNU6-674P-201ENST00000363831 107 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.203-201ENST00000364106 102 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.253-201ENST00000364562 112 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 RNU6-144P-201ENST00000383951 107 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.680-201ENST00000516441 93 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB4Q8WW32 MIR3128-201ENST00000581957 66 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 BX284668.6-201ENST00000606899 438 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 AC073349.3-201ENST00000617616 186 ntBASIC1.81□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.20-201ENST00000362479 113 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.447-201ENST00000384184 113 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.477-201ENST00000384352 108 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.590-201ENST00000410140 107 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB4Q8WW32 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.673-201ENST00000516306 88 ntBASIC1.8□□□□□ -2.12
HMGB4Q8WW32 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB4Q8WW32 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB4Q8WW32 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.478-201ENST00000384358 107 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 RNU6-424P-201ENST00000384367 105 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.539-201ENST00000384635 107 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 SNORD58.1-201ENST00000391313 66 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGB4Q8WW32 RNU6-1023P-201ENST00000516137 106 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGB4Q8WW32 MIR4762-201ENST00000585261 75 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 AL513423.1-201ENST00000621695 132 ntBASIC1.79□□□□□ -2.12
HMGB4Q8WW32 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMGB4Q8WW32 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 SNORD27-201ENST00000363981 72 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.796-201ENST00000364268 102 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 U8.5-201ENST00000364528 136 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.799-201ENST00000364992 102 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 CALM2P4-201ENST00000430810 426 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 PGBD4P5-201ENST00000445958 426 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.78□□□□□ -2.12
HMGB4Q8WW32 Y_RNA.679-201ENST00000516416 91 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 RNA5SP168-201ENST00000516642 112 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
HMGB4Q8WW32 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
HMGB4Q8WW32 MIR126-201ENST00000362291 85 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms