Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC006600.1-201ENST00000572529 153 ntBASIC0.72□□□□□ -2.29
RNF139Q8WU17 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
RNF139Q8WU17 MIR4423-201ENST00000580922 80 ntBASIC0.72□□□□□ -2.29
RNF139Q8WU17 AL096861.1-201ENST00000610899 123 ntBASIC0.72□□□□□ -2.29
RNF139Q8WU17 AC104985.2-201ENST00000620598 500 ntBASIC0.72□□□□□ -2.29
RNF139Q8WU17 Y_RNA.70-201ENST00000362886 110 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 SNORD68-201ENST00000363214 84 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 RNU6-163P-201ENST00000384396 106 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 Y_RNA.570-201ENST00000384750 101 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.71□□□□□ -2.3
RNF139Q8WU17 AF228730.4-201ENST00000421457 183 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 LINC01399-202ENST00000458450 244 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 RBM11P1-201ENST00000604951 799 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 AC010205.1-201ENST00000616668 449 ntBASIC0.71□□□□□ -2.3
RNF139Q8WU17 Y_RNA.5-201ENST00000362334 102 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 SNORD81.1-201ENST00000363064 77 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 RNU6-324P-201ENST00000363957 106 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.253-201ENST00000364562 112 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.269-201ENST00000364685 89 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.329-201ENST00000365209 107 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.336-201ENST00000365307 109 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.428-201ENST00000384078 102 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.529-201ENST00000384586 119 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 MIR522-201ENST00000385071 87 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.621-201ENST00000411065 96 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 MCFD2P1-201ENST00000417812 300 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.7□□□□□ -2.3
RNF139Q8WU17 RPS20P10-201ENST00000451209 253 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 RNU4-77P-201ENST00000516692 156 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 SNORD116.3-201ENST00000517176 78 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 RN7SKP295-201ENST00000517264 153 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
RNF139Q8WU17 AC093027.1-201ENST00000546698 429 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 MIR3192-201ENST00000584920 77 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 PRELID3BP2-201ENST00000605362 201 ntBASIC0.7□□□□□ -2.3
RNF139Q8WU17 Y_RNA.263-201ENST00000364659 114 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 RNU6-1175P-201ENST00000365200 107 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 RNU6-1105P-201ENST00000384774 107 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 MIR1298-201ENST00000408783 112 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 MTCO2P27-201ENST00000420740 428 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.69□□□□□ -2.3
RNF139Q8WU17 RNU6-507P-201ENST00000516045 100 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 AC022616.4-201ENST00000522985 181 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 MIR5188-201ENST00000583467 113 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 AC092447.9-201ENST00000603395 144 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 AC005972.2-201ENST00000604690 348 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RNF139Q8WU17 RMST_2.1-201ENST00000617263 136 ntBASIC0.69□□□□□ -2.3
RNF139Q8WU17 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
RNF139Q8WU17 Y_RNA.252-201ENST00000364556 101 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 AC117470.1-201ENST00000381974 330 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 Y_RNA.458-201ENST00000384240 102 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 SNORA72-201ENST00000384339 132 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 AC245047.8-201ENST00000456455 284 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 Y_RNA.673-201ENST00000516306 88 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 AC004812.1-201ENST00000540773 146 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 SNORD58B-201ENST00000607313 66 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 AL391903.3-201ENST00000612158 163 ntBASIC0.68□□□□□ -2.3
RNF139Q8WU17 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
RNF139Q8WU17 Y_RNA.310-201ENST00000365063 113 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 RNU1-115P-201ENST00000365329 160 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 Y_RNA.462-201ENST00000384268 102 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 MIR452-201ENST00000385020 85 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 RNU6-1009P-201ENST00000390996 107 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.67□□□□□ -2.3
RNF139Q8WU17 AC005042.3-201ENST00000453230 174 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 SNORD111.1-201ENST00000516421 86 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 AC112487.2-201ENST00000637950 304 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
RNF139Q8WU17 Y_RNA.58-201ENST00000362807 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.80-201ENST00000362996 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.154-201ENST00000363624 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 SNORD50B-201ENST00000364995 70 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNY3P1-201ENST00000365085 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.315-201ENST00000365117 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.355-201ENST00000365462 98 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.356-201ENST00000365475 113 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNY3-201ENST00000365484 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNU6-1323P-201ENST00000384025 107 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNY3P14-201ENST00000384309 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 Y_RNA.485-201ENST00000384395 102 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 MIR516B2-201ENST00000385190 85 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 SNORA75.2-201ENST00000391138 150 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 SNORA75.3-201ENST00000391231 150 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 AL590004.1-201ENST00000405321 300 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNU6-855P-201ENST00000410395 104 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 MTND5P20-201ENST00000448677 143 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 AC010655.3-201ENST00000478818 450 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 SNORD45.4-201ENST00000516629 73 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 AP003716.2-201ENST00000528260 108 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 MIR4801-201ENST00000582704 82 ntBASIC0.66□□□□□ -2.3
RNF139Q8WU17 DEFB117-201ENST00000602356 141 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms