Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AP002004.2-201ENST00000531656 154 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 AC011604.1-201ENST00000545978 196 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 MIR4643-201ENST00000577473 78 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 POLR3GP1-201ENST00000594073 261 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 AP000942.4-201ENST00000604811 241 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 AC013791.1-201ENST00000616619 62 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 snoU18.1-201ENST00000629629 71 ntBASIC1.86□□□□□ -2.11
VPS52Q8N1B4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS52Q8N1B4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS52Q8N1B4 SNORA1B-201ENST00000362535 133 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 SNORA4.2-201ENST00000365313 147 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 RNU6-950P-201ENST00000384651 107 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 AP1B1P2-201ENST00000416196 106 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 BTF3P11-201ENST00000426582 477 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 U8.19-201ENST00000459095 133 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS52Q8N1B4 AC117454.1-201ENST00000491120 168 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 MIR3128-201ENST00000581957 66 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 BX284668.6-201ENST00000606899 438 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS52Q8N1B4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS52Q8N1B4 AC068700.1-201ENST00000565862 3754 ntBASIC1.85□□□□□ -2.11
VPS52Q8N1B4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
VPS52Q8N1B4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.84□□□□□ -2.11
VPS52Q8N1B4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 SNORA12.1-201ENST00000390873 148 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 RNU6-440P-201ENST00000390882 105 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 RNU2-7P-201ENST00000410794 178 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 RNU6-651P-201ENST00000411040 105 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS52Q8N1B4 MIR5692C2-201ENST00000577959 77 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 MIR3618-201ENST00000580330 88 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 AC005357.1-201ENST00000588399 301 ntBASIC1.84□□□□□ -2.11
VPS52Q8N1B4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
VPS52Q8N1B4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 RNU6-144P-201ENST00000383951 107 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 RNU6-211P-201ENST00000384047 107 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 MTCO2P33-201ENST00000402100 465 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 RNU7-28P-201ENST00000516759 62 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 AC134026.1-201ENST00000623249 2239 ntBASIC1.83□□□□□ -2.12
VPS52Q8N1B4 RNU6-674P-201ENST00000363831 107 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VPS52Q8N1B4 SNORA36B-201ENST00000410438 131 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 RN7SKP200-201ENST00000410564 320 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 RNU6-321P-201ENST00000410912 106 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS52Q8N1B4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS52Q8N1B4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS52Q8N1B4 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 AC011921.3-201ENST00000605540 361 ntBASIC1.82□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.76-201ENST00000362931 109 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC233266.1-201ENST00000454518 96 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS52Q8N1B4 RNU6-437P-201ENST00000459408 95 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 RPL23AP54-201ENST00000495129 419 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS52Q8N1B4 RNU2-56P-201ENST00000516826 190 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS52Q8N1B4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC103810.8-201ENST00000607347 118 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC242852.1-201ENST00000612151 96 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC073349.3-201ENST00000617616 186 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 AC244015.1-201ENST00000622301 99 ntBASIC1.81□□□□□ -2.12
VPS52Q8N1B4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VPS52Q8N1B4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS52Q8N1B4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS52Q8N1B4 MIR337-201ENST00000362281 93 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.54-201ENST00000362766 105 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 SNORD27-201ENST00000363981 72 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 RNY1-201ENST00000364228 113 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 RNU6-969P-201ENST00000383900 105 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.489-201ENST00000384410 101 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 RNA5SP482-201ENST00000391269 118 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS52Q8N1B4 COX6CP10-201ENST00000416832 224 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS52Q8N1B4 FTH1P12-201ENST00000432137 551 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AL049830.1-201ENST00000468034 425 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AC099513.1-201ENST00000490423 301 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 OR9P1P-201ENST00000496431 281 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 AC005840.1-201ENST00000498412 377 ntBASIC1.8□□□□□ -2.12
VPS52Q8N1B4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms