| PARP9 | Q8IXQ6 | SNORD115-1-201 | ENST00000364961 | 82 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORD115-26-201 | ENST00000365067 | 82 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORD115-10-201 | ENST00000365073 | 81 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | Y_RNA.328-201 | ENST00000365208 | 113 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORD115-43-201 | ENST00000365503 | 82 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORD115-36-201 | ENST00000365629 | 82 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORA31.10-201 | ENST00000516482 | 106 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | AC090616.3-202 | ENST00000583346 | 205 nt | TSL 2 BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | AL355376.2-201 | ENST00000603866 | 267 nt | TSL 5 BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SNORD115-40-201 | ENST00000606510 | 82 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SLC8A1-207 | ENST00000406785 | 20987 nt | TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| PARP9 | Q8IXQ6 | SENP7-205 | ENST00000394091 | 4434 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | ZNF483-201 | ENST00000309235 | 3655 nt | APPRIS P1 TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC107297.1-201 | ENST00000459991 | 176 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU7-123P-201 | ENST00000515911 | 60 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | IGLV3-17-201 | ENST00000519099 | 244 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR5187-201 | ENST00000583479 | 76 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | ZNF861P-201 | ENST00000588126 | 639 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | ERBIN-201 | ENST00000284037 | 8647 nt | TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | FAM184A-202 | ENST00000352896 | 3700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR342-201 | ENST00000362212 | 99 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SNORA63D-201 | ENST00000364359 | 132 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SNORA1.2-201 | ENST00000365189 | 134 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | UBE2Q2P12-201 | ENST00000414573 | 204 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR5582-201 | ENST00000579697 | 68 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR3200-201 | ENST00000580767 | 85 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | IDE-201 | ENST00000265986 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | TRDN-201 | ENST00000334268 | 4770 nt | APPRIS P3 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | USP45-208 | ENST00000500704 | 5826 nt | APPRIS P1 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SLITRK6-201 | ENST00000400286 | 4318 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | EYS-204 | ENST00000370621 | 10485 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | Y_RNA.544-201 | ENST00000384650 | 113 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR452-201 | ENST00000385020 | 85 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC020594.1-201 | ENST00000437680 | 338 nt | TSL 3 BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | HSPE1P9-201 | ENST00000440046 | 311 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU6-998P-201 | ENST00000515894 | 101 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RN7SKP18-201 | ENST00000516005 | 275 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MME-216 | ENST00000615825 | 5523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | FIGNL1-212 | ENST00000613602 | 3187 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | TTN-204 | ENST00000360870 | 18218 nt | TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | NBEAL1-203 | ENST00000449802 | 10938 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNA5SP51-201 | ENST00000364750 | 119 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | Y_RNA.369-201 | ENST00000365568 | 117 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR520A-201 | ENST00000384862 | 85 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR548D2-201 | ENST00000384955 | 97 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AP001458.1-201 | ENST00000532626 | 92 nt | TSL 3 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | LINC00508-201 | ENST00000538901 | 194 nt | TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC026333.2-201 | ENST00000542164 | 106 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SPTSSB-205 | ENST00000620149 | 231 nt | APPRIS P1 BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR4679-1-201 | ENST00000637619 | 75 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | ESCO1-201 | ENST00000269214 | 4523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | OSTN-202 | ENST00000445281 | 3134 nt | TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MBNL3-204 | ENST00000370853 | 2661 nt | APPRIS P4 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | PTBP2-211 | ENST00000609116 | 12014 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | VPS13C-203 | ENST00000395896 | 14579 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AL442644.1-201 | ENST00000454390 | 3105 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR183-201 | ENST00000384958 | 110 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR218-2-201 | ENST00000385006 | 110 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU6ATAC40P-201 | ENST00000408580 | 137 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNY4P30-201 | ENST00000410216 | 95 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RN7SL293P-201 | ENST00000481765 | 281 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR5009-201 | ENST00000578736 | 100 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR3922-201 | ENST00000585192 | 84 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AP003355.3-201 | ENST00000623465 | 114 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC017071.1-201 | ENST00000564407 | 2204 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU1-70P-201 | ENST00000362618 | 164 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | RNU4-16P-201 | ENST00000364737 | 141 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | U8.6-201 | ENST00000364939 | 135 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | IGHVII-40-1-201 | ENST00000517316 | 58 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC068339.1-201 | ENST00000526965 | 141 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | MIR5195-201 | ENST00000583555 | 115 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | U6.105-201 | ENST00000637379 | 88 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | ROS1-202 | ENST00000368508 | 7435 nt | APPRIS P2 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| PARP9 | Q8IXQ6 | DOPEY1-203 | ENST00000369739 | 7743 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| PARP9 | Q8IXQ6 | MGAT4C-210 | ENST00000620241 | 3194 nt | APPRIS P1 TSL 2 BASIC | 3.46 | □□□□□ -1.86 | | |
| PARP9 | Q8IXQ6 | RNU1-109P-201 | ENST00000383960 | 147 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| PARP9 | Q8IXQ6 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| PARP9 | Q8IXQ6 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| PARP9 | Q8IXQ6 | MIR634-201 | ENST00000385208 | 97 nt | BASIC | 3.46 | □□□□□ -1.86 | | |