Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-823P-201ENST00000391042 103 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 POLR2KP2-201ENST00000438155 177 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 AC010655.3-201ENST00000478818 450 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-397P-201ENST00000516226 104 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 RNU7-116P-201ENST00000516940 62 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.715-201ENST00000517082 110 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-988P-201ENST00000519081 107 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 FAM106DP-201ENST00000586416 501 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 POLR3GP1-201ENST00000594073 261 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 AL357312.1-201ENST00000603879 298 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
C9orf40Q8IXQ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-450P-201ENST00000364654 107 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.389-201ENST00000383924 113 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 MIR522-201ENST00000385071 87 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-101P-201ENST00000410323 104 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 Y_RNA.604-201ENST00000410574 102 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 AC104695.3-201ENST00000604052 296 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 MIR376A1-201ENST00000616574 68 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 AC134503.1-201ENST00000633048 54 ntBASIC0.97□□□□□ -2.25
C9orf40Q8IXQ3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 SNORD113-8-201ENST00000363497 74 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.183-201ENST00000363882 113 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 SNRPGP10-201ENST00000432323 225 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 RPL39P39-201ENST00000455840 151 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AC117454.1-201ENST00000491120 168 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AL133373.1-201ENST00000497098 94 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AC024405.2-202ENST00000532731 184 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 AP003357.1-201ENST00000604497 148 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 MIR8070-201ENST00000616510 88 ntBASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.96□□□□□ -2.26
C9orf40Q8IXQ3 RNU4-80P-201ENST00000363200 141 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.138-201ENST00000363462 102 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-131P-201ENST00000391144 107 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 MIR1298-201ENST00000408783 112 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 MIR1252-201ENST00000408861 65 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 MTCO2P12-201ENST00000427426 682 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 OR2A41P-201ENST00000473586 105 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RPL23AP54-201ENST00000495129 419 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORA31.2-201ENST00000516019 134 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RNU7-115P-201ENST00000516433 55 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 SNORD45.4-201ENST00000516629 73 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-897P-201ENST00000517135 105 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 MIR4300-201ENST00000581016 96 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RAC1P9-201ENST00000604990 392 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 MIR548AY-201ENST00000617669 107 ntBASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-797P-201ENST00000363101 109 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 U8.7-201ENST00000364940 136 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 SNORA22B-201ENST00000383876 138 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 MIR548P-201ENST00000408336 84 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.602-201ENST00000410535 92 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 SNORA31.4-201ENST00000516049 129 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 RNU7-40P-201ENST00000516397 64 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 SNORA70.22-201ENST00000517160 124 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 AC127455.1-201ENST00000565496 145 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
C9orf40Q8IXQ3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 SNORD50B-201ENST00000364995 70 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 MIR516B2-201ENST00000385190 85 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 MIR618-201ENST00000385287 98 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 SNORD115-46-201ENST00000390982 71 ntBASIC0.93□□□□□ -2.26
C9orf40Q8IXQ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms