Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNU6-1084P-201ENST00000362498 107 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 Y_RNA.248-201ENST00000364501 109 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 Y_RNA.314-201ENST00000365114 102 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 MIR520C-201ENST00000385005 87 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 MIR136-201ENST00000385207 82 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 Y_RNA.599-201ENST00000410489 109 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 MTCO3P10-201ENST00000455912 772 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 RNU6-436P-201ENST00000516171 114 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 RNU6-1012P-201ENST00000516606 109 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 SNORD45.4-201ENST00000516629 73 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 SNORA74.3-201ENST00000517108 154 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 MIR4659A-201ENST00000580269 81 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 AC022306.2-201ENST00000617563 647 ntBASIC0.59□□□□□ -2.31
CDKL3Q8IVW4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CDKL3Q8IVW4 MIR103A2-201ENST00000362154 78 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 SNORA25.3-201ENST00000363205 127 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 SNORD14.1-201ENST00000365609 90 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 AC117470.1-201ENST00000381974 330 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 MIR628-201ENST00000385229 95 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 AL390729.2-201ENST00000416137 156 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 FABP5P4-201ENST00000437203 171 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.653-201ENST00000459091 95 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 RNU6-559P-201ENST00000516151 98 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 AC005972.2-201ENST00000604690 348 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 AC104465.1-201ENST00000611365 139 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 AC092794.1-201ENST00000612734 582 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 U2.1-201ENST00000618978 145 ntBASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CDKL3Q8IVW4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 SNORA72-201ENST00000384339 132 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.474-201ENST00000384341 102 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 MTND1P2-201ENST00000430604 821 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 SNRPGP10-201ENST00000432323 225 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 RN7SKP164-201ENST00000516138 266 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 SNORA18.7-201ENST00000516910 131 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 AC005730.3-201ENST00000583067 366 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.146-201ENST00000363549 102 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.230-201ENST00000364348 109 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 snoU2-30.1-201ENST00000365012 70 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.329-201ENST00000365209 107 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 RNU6-708P-201ENST00000384217 107 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 RNU6-1297P-201ENST00000384415 104 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 MIR15B-201ENST00000385045 98 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 RNU6-131P-201ENST00000391144 107 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.619-201ENST00000410951 90 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC096644.2-201ENST00000429278 159 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC023827.1-201ENST00000569247 97 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 MIR4764-201ENST00000580680 88 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC131055.1-201ENST00000584626 316 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC113139.1-201ENST00000605049 239 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC022441.3-201ENST00000605737 136 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC133104.2-201ENST00000615272 193 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 SEPT14P17-201ENST00000617978 177 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 AC138305.3-201ENST00000624988 240 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 U6.92-201ENST00000636464 89 ntBASIC0.56□□□□□ -2.32
CDKL3Q8IVW4 SNORD50B-201ENST00000364995 70 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 RNY1P4-201ENST00000384595 115 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 MIR559-201ENST00000385188 96 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 RNU6-855P-201ENST00000410395 104 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 MCFD2P1-201ENST00000417812 300 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 HMGN2P32-201ENST00000444648 269 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 U8.19-201ENST00000459095 133 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 RNU6-911P-201ENST00000516523 104 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 AL512605.2-201ENST00000592972 256 ntBASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.27-201ENST00000362540 103 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RNU6-490P-201ENST00000362985 107 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RNA5SP48-201ENST00000363969 126 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 AC099799.1-201ENST00000439809 192 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 SNORD123-201ENST00000459473 70 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RNU7-43P-201ENST00000516554 64 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RN7SKP295-201ENST00000517264 153 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 MTND4LP32-201ENST00000636111 270 ntBASIC0.54□□□□□ -2.32
CDKL3Q8IVW4 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.259-201ENST00000364619 101 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 RNU6-1175P-201ENST00000365200 107 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 RNU6-710P-201ENST00000410424 105 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 RNU6-699P-201ENST00000517081 110 ntBASIC0.53□□□□□ -2.32
CDKL3Q8IVW4 AC006600.1-201ENST00000572529 153 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms