Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 RNU6-559P-201ENST00000516151 98 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 AC012433.1-201ENST00000588916 398 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MIR6516-201ENST00000630554 81 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MTND4LP32-201ENST00000636111 270 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC50Q8IVM0 RNU6-1175P-201ENST00000365200 107 ntBASIC0.58□□□□□ -2.32
CCDC50Q8IVM0 RNU6-192P-201ENST00000391253 100 ntBASIC0.58□□□□□ -2.32
CCDC50Q8IVM0 AL392103.1-201ENST00000447000 198 ntBASIC0.58□□□□□ -2.32
CCDC50Q8IVM0 RNU6-699P-201ENST00000517081 110 ntBASIC0.58□□□□□ -2.32
CCDC50Q8IVM0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 RNA5SP48-201ENST00000363969 126 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.310-201ENST00000365063 113 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 MIR628-201ENST00000385229 95 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.653-201ENST00000459091 95 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 AC139792.2-201ENST00000624218 587 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 AC008133.2-201ENST00000624540 351 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 MIR4251-201ENST00000635819 61 ntBASIC0.57□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.341-201ENST00000365341 102 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.570-201ENST00000384750 101 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 MIR15B-201ENST00000385045 98 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 HMGN2P32-201ENST00000444648 269 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 RN7SKP295-201ENST00000517264 153 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 POLR3GP1-201ENST00000594073 261 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 DEFB117-201ENST00000602356 141 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 RBM11P1-201ENST00000604951 799 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC113139.1-201ENST00000605049 239 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC092794.1-201ENST00000612734 582 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 MIR6504-201ENST00000613520 61 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AC068700.1-201ENST00000565862 3754 ntBASIC0.56□□□□□ -2.32
CCDC50Q8IVM0 AL442644.1-201ENST00000454390 3105 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 SNORD81.1-201ENST00000363064 77 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.230-201ENST00000364348 109 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 RNU6-1323P-201ENST00000384025 107 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 AF228730.4-201ENST00000421457 183 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 AC091951.2-201ENST00000500762 203 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 AC024405.2-202ENST00000532731 184 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 AC093027.1-201ENST00000546698 429 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 MIR4452-201ENST00000583004 71 ntBASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC50Q8IVM0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.27-201ENST00000362540 103 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 SNORD18A-201ENST00000363753 72 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 SNORD14E-201ENST00000364009 85 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 Y_RNA.203-201ENST00000364106 102 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 U8.7-201ENST00000364940 136 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 SNORD116-29-201ENST00000384516 83 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 SNORD111-201ENST00000408139 94 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 MIR1278-201ENST00000408753 81 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 AC006600.1-201ENST00000572529 153 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 MIR3145-201ENST00000580727 82 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
CCDC50Q8IVM0 RNU6-490P-201ENST00000362985 107 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 SNORA25.9-201ENST00000365087 128 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 SNRPGP14-201ENST00000435400 219 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 AC005042.3-201ENST00000453230 174 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 HMGN1P10-201ENST00000474557 553 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 RPL23AP54-201ENST00000495129 419 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 AC005730.3-201ENST00000583067 366 ntBASIC0.53□□□□□ -2.32
CCDC50Q8IVM0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.796-201ENST00000364268 102 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.799-201ENST00000364992 102 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.331-201ENST00000365267 102 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.619-201ENST00000410951 90 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 AC067940.1-201ENST00000458411 300 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 AC010655.3-201ENST00000478818 450 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 RNU6-911P-201ENST00000516523 104 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 RNU11-2P-201ENST00000516898 142 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.714-201ENST00000517065 90 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 MIR4423-201ENST00000580922 80 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 MIR4300-201ENST00000581016 96 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 AP003357.1-201ENST00000604497 148 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms