Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.39□□□□□ -2.19
NPHP3Q7Z494 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 DEFB117-201ENST00000602356 141 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 AL356055.1-201ENST00000602528 446 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.38□□□□□ -2.19
NPHP3Q7Z494 MTCYBP6-201ENST00000441810 138 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 HSPE1P13-201ENST00000451143 297 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP3Q7Z494 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 AL020996.3-201ENST00000606617 222 ntBASIC1.38□□□□□ -2.19
NPHP3Q7Z494 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.105-201ENST00000363182 111 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.265-201ENST00000364677 108 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 SNORD63-201ENST00000384262 68 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 AL162725.1-201ENST00000435405 301 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 RNU2-56P-201ENST00000516826 190 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 RNU6-897P-201ENST00000517135 105 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 AC004832.4-201ENST00000608952 331 ntBASIC1.37□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.158-201ENST00000363651 101 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 RNA5SP259-201ENST00000365541 109 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 RNU6-21P-201ENST00000384710 107 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 AL590004.1-201ENST00000405321 300 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 AL034345.1-201ENST00000407768 123 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 MIR1252-201ENST00000408861 65 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.713-201ENST00000517013 96 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 MIR4680-201ENST00000580906 66 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 AC044792.1-201ENST00000593294 196 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
NPHP3Q7Z494 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.36□□□□□ -2.19
NPHP3Q7Z494 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.11-201ENST00000362375 109 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 SNORD113-8-201ENST00000363497 74 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 RNU6-102P-201ENST00000384485 104 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 MIR520G-201ENST00000385064 90 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 RNU6-855P-201ENST00000410395 104 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.602-201ENST00000410535 92 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 AL390729.2-201ENST00000416137 156 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.35□□□□□ -2.19
NPHP3Q7Z494 SNX2P2-201ENST00000424553 323 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 CALM2P4-201ENST00000430810 426 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 Z98949.2-201ENST00000440996 144 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 PGBD4P5-201ENST00000445958 426 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 RPS20P10-201ENST00000451209 253 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
NPHP3Q7Z494 OR9P1P-201ENST00000496431 281 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.35□□□□□ -2.19
NPHP3Q7Z494 MIR4300-201ENST00000581016 96 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 MIR376A1-201ENST00000616574 68 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.35□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.26-201ENST00000362539 101 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.183-201ENST00000363882 113 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.202-201ENST00000364083 110 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNU6-806P-201ENST00000365147 105 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 SNORA63.7-201ENST00000365579 123 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.383-201ENST00000383855 97 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNU6-1227P-201ENST00000383981 107 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNU11-5P-201ENST00000391216 129 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 U8.16-201ENST00000391279 133 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNU6-121P-201ENST00000410525 99 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.621-201ENST00000411065 96 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.2
NPHP3Q7Z494 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AC098869.1-201ENST00000481627 292 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.721-201ENST00000517207 102 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AP002004.2-201ENST00000531656 154 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 MIR4778-201ENST00000577635 80 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AC113195.1-201ENST00000579952 141 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.34□□□□□ -2.2
NPHP3Q7Z494 AC073349.3-201ENST00000617616 186 ntBASIC1.34□□□□□ -2.2
NPHP3Q7Z494 RNU6-1123P-201ENST00000362347 106 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.341-201ENST00000365341 102 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 SNORA33.2-201ENST00000365413 134 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.455-201ENST00000384230 98 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 ELOCP20-201ENST00000422460 345 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 SEPT14P8-201ENST00000508026 178 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 RNU6-1116P-201ENST00000517269 99 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AC131281.1-201ENST00000522984 164 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AL162424.1-201ENST00000602325 221 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AC022140.2-201ENST00000623500 188 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 SNORD3E-202ENST00000627253 216 ntBASIC1.33□□□□□ -2.2
NPHP3Q7Z494 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.210-201ENST00000364161 110 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.214-201ENST00000364201 112 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.310-201ENST00000365063 113 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 MIR562-201ENST00000384894 95 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 SNORD115-46-201ENST00000390982 71 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 AC093850.1-201ENST00000454121 251 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 HSPE1P25-201ENST00000455484 251 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms