Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.89□□□□□ -2.71
VPS13CQ709C8 AL391834.2-201ENST00000609982 546 ntBASIC-1.89□□□□□ -2.71
VPS13CQ709C8 SNORD115-34-201ENST00000362441 82 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-354P-201ENST00000383862 107 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-610P-201ENST00000384264 107 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AL359672.1-201ENST00000442302 409 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC010587.1-201ENST00000505809 469 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-720P-201ENST00000516363 108 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-528P-201ENST00000516926 100 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-58P-201ENST00000517143 103 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-740P-201ENST00000364734 105 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC090960.1-201ENST00000421072 306 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.9□□□□□ -2.71
VPS13CQ709C8 MIR544B-201ENST00000582372 78 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.9□□□□□ -2.71
VPS13CQ709C8 SNORD39.3-201ENST00000584451 71 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC099654.9-201ENST00000637055 678 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 RNU6-175P-201ENST00000516896 107 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC131281.1-201ENST00000522984 164 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AC004217.3-201ENST00000551552 878 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 MIR4473-201ENST00000583731 91 ntBASIC-1.9□□□□□ -2.71
VPS13CQ709C8 AL031274.1-201ENST00000450334 232 ntBASIC-1.91□□□□□ -2.71
VPS13CQ709C8 RNU6-166P-201ENST00000384371 107 ntBASIC-1.91□□□□□ -2.72
VPS13CQ709C8 BNIP3P40-201ENST00000596017 556 ntBASIC-1.91□□□□□ -2.72
VPS13CQ709C8 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.91□□□□□ -2.72
VPS13CQ709C8 SNORD56.1-201ENST00000362913 68 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 RNY3P4-201ENST00000384428 101 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 AL603914.1-201ENST00000401964 204 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 MTND1P21-201ENST00000412991 285 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 RNU6-765P-201ENST00000516916 99 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 AC005520.5-201ENST00000613926 164 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 SEPT14P24-201ENST00000447236 180 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 SEPT14P4-201ENST00000513445 186 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 MIR6082-201ENST00000613604 109 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 RNU4-24P-201ENST00000364565 139 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.92□□□□□ -2.72
VPS13CQ709C8 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 MTND3P4-201ENST00000453537 303 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 SNORD75.2-201ENST00000408784 58 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 AC013470.1-201ENST00000453438 462 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.93□□□□□ -2.72
VPS13CQ709C8 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 SNORD115-23-201ENST00000364461 82 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 MIR513C-201ENST00000401352 84 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 ZNF321P-202ENST00000550843 495 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 AC091178.2-201ENST00000584401 117 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 BNIP3P9-201ENST00000603714 553 ntBASIC-1.93□□□□□ -2.72
VPS13CQ709C8 RNU6-223P-201ENST00000362830 107 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 RNU6-376P-201ENST00000384731 106 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 RNU6-168P-201ENST00000516189 101 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 AL121655.1-201ENST00000605811 308 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 AC011603.4-201ENST00000611325 277 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 AC080013.3-201ENST00000606839 578 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 RPL30P16-201ENST00000419341 429 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 PMCHL1-202ENST00000423102 261 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 MTATP6P13-201ENST00000438531 667 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 FGF7P6-202ENST00000451282 293 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.94□□□□□ -2.72
VPS13CQ709C8 MIR4491-201ENST00000581087 68 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 MIR4791-201ENST00000607666 84 ntBASIC-1.94□□□□□ -2.72
VPS13CQ709C8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.95□□□□□ -2.72
VPS13CQ709C8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.95□□□□□ -2.72
VPS13CQ709C8 MTND5P34-201ENST00000568888 325 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AL139418.1-201ENST00000613613 177 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 SNORD113-7-201ENST00000363762 77 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 MIR1305-201ENST00000408300 86 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 MTND4P25-201ENST00000441039 533 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AL358944.1-201ENST00000528537 144 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 RNU6-708P-201ENST00000384217 107 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 MIR3123-201ENST00000583417 75 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AC087683.1-201ENST00000591187 441 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AL049861.1-201ENST00000603130 150 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 AL133255.1-201ENST00000606374 441 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 PART1_1.1-201ENST00000611761 217 ntBASIC-1.95□□□□□ -2.72
VPS13CQ709C8 SNAP23P1-201ENST00000433229 246 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 RNU6-378P-201ENST00000384324 107 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 SNRPGP8-201ENST00000454064 226 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 AL163152.1-201ENST00000642001 374 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 SNORA18-201ENST00000384416 132 ntBASIC-1.96□□□□□ -2.72
VPS13CQ709C8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.97□□□□□ -2.72
VPS13CQ709C8 SNORD68-201ENST00000363214 84 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 RNU6-397P-201ENST00000516226 104 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 RNU2-10P-201ENST00000516375 211 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 AL354696.1-201ENST00000614652 497 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 SNORA31.19-201ENST00000517079 126 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 RNU6-90P-201ENST00000606352 106 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms