Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SWSAP1Q6NVH7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 RNU6-136P-201ENST00000384663 107 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 MTCO2P33-201ENST00000402100 465 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 RPL30P13-201ENST00000418873 348 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 AC117454.1-201ENST00000491120 168 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 RNU6-1007P-201ENST00000516586 107 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 RNA5SP437-201ENST00000517249 129 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 MIR5692C2-201ENST00000577959 77 ntBASIC2.09□□□□□ -2.07
SWSAP1Q6NVH7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SWSAP1Q6NVH7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-674P-201ENST00000363831 107 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 U8.7-201ENST00000364940 136 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.304-201ENST00000365011 112 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 SNORA36B-201ENST00000410438 131 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-437P-201ENST00000459408 95 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 AL049830.1-201ENST00000468034 425 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 SNORD116-28-201ENST00000516123 91 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-548P-201ENST00000517083 115 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 MIR4769-201ENST00000584126 77 ntBASIC2.08□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-414P-201ENST00000363705 104 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-200P-201ENST00000364743 107 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-907P-201ENST00000390924 102 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 MIR1298-201ENST00000408783 112 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.07□□□□□ -2.08
SWSAP1Q6NVH7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 SNORA1B-201ENST00000362535 133 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 RNA5SP99-201ENST00000364020 114 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.700-201ENST00000516806 100 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 AC130289.1-201ENST00000577321 73 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 MIR3668-201ENST00000582138 75 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 JPX_2.1-201ENST00000614161 69 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 AC134026.1-201ENST00000623249 2239 ntBASIC2.06□□□□□ -2.08
SWSAP1Q6NVH7 MIR367-201ENST00000362299 68 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 MIR526A2-201ENST00000390198 65 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 AC023449.1-201ENST00000454464 154 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-237P-201ENST00000515985 71 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 AC087685.1-201ENST00000587507 141 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 AL365265.1-201ENST00000621045 234 ntBASIC2.05□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.83-201ENST00000363005 113 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.262-201ENST00000364641 102 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 HMGN1P7-201ENST00000491722 313 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 MIR4724-201ENST00000579485 89 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 AL353997.5-201ENST00000618886 171 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 AL513423.1-201ENST00000621695 132 ntBASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SWSAP1Q6NVH7 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 SNORA8.3-201ENST00000384679 139 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 RNA5SP496-201ENST00000391240 109 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 STAG3L5P-204ENST00000443759 179 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 PGBD4P5-201ENST00000445958 426 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 RNU6-138P-201ENST00000515952 107 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AL929325.1-201ENST00000603096 117 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
SWSAP1Q6NVH7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 MIR411-201ENST00000362239 96 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 RNU6-653P-201ENST00000363074 106 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 JTBP1-201ENST00000441314 247 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 AC100767.1-201ENST00000528178 123 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 MIR3198-2-201ENST00000577868 80 ntBASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
SWSAP1Q6NVH7 Z83818.1-201ENST00000603584 150 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms