Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL606517.2-201ENST00000442855 241 ntBASIC2.58□□□□□ -2
E4F1Q66K89 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
E4F1Q66K89 AC104435.1-201ENST00000483483 166 ntBASIC2.58□□□□□ -2
E4F1Q66K89 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.58□□□□□ -2
E4F1Q66K89 RNU6-126P-201ENST00000516685 103 ntBASIC2.58□□□□□ -2
E4F1Q66K89 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
E4F1Q66K89 AC005786.1-201ENST00000588553 154 ntBASIC2.58□□□□□ -2
E4F1Q66K89 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.58□□□□□ -2
E4F1Q66K89 AL365222.1-201ENST00000614661 98 ntBASIC2.58□□□□□ -2
E4F1Q66K89 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
E4F1Q66K89 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.57□□□□□ -2
E4F1Q66K89 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
E4F1Q66K89 RNU6-915P-201ENST00000364943 103 ntBASIC2.57□□□□□ -2
E4F1Q66K89 MIR802-201ENST00000390235 94 ntBASIC2.57□□□□□ -2
E4F1Q66K89 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.57□□□□□ -2
E4F1Q66K89 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.57□□□□□ -2
E4F1Q66K89 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.57□□□□□ -2
E4F1Q66K89 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
E4F1Q66K89 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
E4F1Q66K89 MIR5094-201ENST00000578766 85 ntBASIC2.57□□□□□ -2
E4F1Q66K89 AC097639.2-201ENST00000603159 172 ntBASIC2.57□□□□□ -2
E4F1Q66K89 TUG1_4.1-201ENST00000619464 181 ntBASIC2.57□□□□□ -2
E4F1Q66K89 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.57□□□□□ -2
E4F1Q66K89 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
E4F1Q66K89 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
E4F1Q66K89 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
E4F1Q66K89 Y_RNA.251-201ENST00000364551 99 ntBASIC2.56□□□□□ -2
E4F1Q66K89 MIR539-201ENST00000365690 78 ntBASIC2.56□□□□□ -2
E4F1Q66K89 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
E4F1Q66K89 RNU6-479P-201ENST00000516348 105 ntBASIC2.56□□□□□ -2
E4F1Q66K89 RNU6-1234P-201ENST00000516877 103 ntBASIC2.56□□□□□ -2
E4F1Q66K89 AC008507.4-201ENST00000585464 127 ntBASIC2.56□□□□□ -2
E4F1Q66K89 AC069114.2-201ENST00000604699 304 ntBASIC2.56□□□□□ -2
E4F1Q66K89 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
E4F1Q66K89 CTSLP2-204ENST00000629029 392 ntBASIC2.56□□□□□ -2
E4F1Q66K89 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.56□□□□□ -2
E4F1Q66K89 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
E4F1Q66K89 Y_RNA.265-201ENST00000364677 108 ntBASIC2.55□□□□□ -2
E4F1Q66K89 MIR522-201ENST00000385071 87 ntBASIC2.55□□□□□ -2
E4F1Q66K89 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
E4F1Q66K89 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.55□□□□□ -2
E4F1Q66K89 RNA5SP137-201ENST00000516833 135 ntBASIC2.55□□□□□ -2
E4F1Q66K89 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.55□□□□□ -2
E4F1Q66K89 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
E4F1Q66K89 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.54□□□□□ -2
E4F1Q66K89 RNU6-1084P-201ENST00000362498 107 ntBASIC2.54□□□□□ -2
E4F1Q66K89 Y_RNA.66-201ENST00000362862 102 ntBASIC2.54□□□□□ -2
E4F1Q66K89 Y_RNA.218-201ENST00000364218 104 ntBASIC2.54□□□□□ -2
E4F1Q66K89 SNORA22C-201ENST00000384614 134 ntBASIC2.54□□□□□ -2
E4F1Q66K89 RNU6-1168P-201ENST00000390831 104 ntBASIC2.54□□□□□ -2
E4F1Q66K89 AC008267.6-201ENST00000441664 139 ntBASIC2.54□□□□□ -2
E4F1Q66K89 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
E4F1Q66K89 SNORA18.4-201ENST00000516440 124 ntBASIC2.54□□□□□ -2
E4F1Q66K89 RNU6-504P-201ENST00000516568 104 ntBASIC2.54□□□□□ -2
E4F1Q66K89 RNU6-1270P-201ENST00000517128 108 ntBASIC2.54□□□□□ -2
E4F1Q66K89 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
E4F1Q66K89 AC084364.2-201ENST00000546924 395 ntBASIC2.54□□□□□ -2
E4F1Q66K89 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
E4F1Q66K89 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
E4F1Q66K89 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
E4F1Q66K89 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.54□□□□□ -2
E4F1Q66K89 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
E4F1Q66K89 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.53□□□□□ -2
E4F1Q66K89 Y_RNA.71-201ENST00000362892 104 ntBASIC2.53□□□□□ -2
E4F1Q66K89 FTH1P12-201ENST00000432137 551 ntBASIC2.53□□□□□ -2
E4F1Q66K89 Y_RNA.666-201ENST00000516187 112 ntBASIC2.53□□□□□ -2
E4F1Q66K89 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
E4F1Q66K89 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
E4F1Q66K89 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
E4F1Q66K89 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.53□□□□□ -2
E4F1Q66K89 AP001340.1-201ENST00000624405 217 ntBASIC2.53□□□□□ -2
E4F1Q66K89 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.53□□□□□ -2
E4F1Q66K89 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
E4F1Q66K89 U8.1-201ENST00000362843 134 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 RNU6-1019P-201ENST00000364424 107 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 Y_RNA.261-201ENST00000364631 102 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.52□□□□□ -2.01
E4F1Q66K89 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 RPL23AP83-201ENST00000434984 473 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 RNU6-1333P-201ENST00000516162 93 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 AC007751.1-201ENST00000529260 376 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 AC091544.4-201ENST00000555268 342 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 MIR3129-201ENST00000581095 76 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 AC087685.1-201ENST00000587507 141 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 U7.2-201ENST00000607576 63 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 MIR7106-201ENST00000612419 65 ntBASIC2.52□□□□□ -2.01
E4F1Q66K89 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
E4F1Q66K89 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
E4F1Q66K89 SNORD50B-201ENST00000364995 70 ntBASIC2.51□□□□□ -2.01
E4F1Q66K89 SNORD61-201ENST00000384252 73 ntBASIC2.51□□□□□ -2.01
E4F1Q66K89 MIR518A2-201ENST00000384966 87 ntBASIC2.51□□□□□ -2.01
E4F1Q66K89 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.51□□□□□ -2.01
E4F1Q66K89 STAG3L5P-204ENST00000443759 179 ntBASIC2.51□□□□□ -2.01
E4F1Q66K89 Y_RNA.686-201ENST00000516548 134 ntBASIC2.51□□□□□ -2.01
E4F1Q66K89 AC131055.1-201ENST00000584626 316 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms